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AT3G01850.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.963
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Aldolase-type TIM barrel family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Aldolase-type TIM barrel family protein; FUNCTIONS IN: ribulose-phosphate 3-epimerase activity, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate 3-epimerase (InterPro:IPR000056), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT1G63290.1); Has 9076 Blast hits to 9073 proteins in 2640 species: Archae - 49; Bacteria - 5613; Metazoa - 177; Fungi - 138; Plants - 141; Viruses - 0; Other Eukaryotes - 2958 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G01850-MONOMERBioCyc:ARA:GQT-1849-MONOMEREC:5.1.3.1eggNOG:COG0036eggNOG:KOG3111EMBL:AF370479EMBL:AY086329
EMBL:BT002174EMBL:CP002686EnsemblPlants:AT3G01850EnsemblPlants:AT3G01850.1EnsemblPlants:AT3G01850.2entrez:821068Gene3D:3.20.20.70
GeneID:821068GO:GO:0004750GO:GO:0005975GO:GO:0006098GO:GO:0046872Gramene:AT3G01850.1Gramene:AT3G01850.2
gramene_pathway:5.1.3.1gramene_pathway:CALVIN-PWYgramene_pathway:NONOXIPENT-PWYgramene_pathway:PWY-5723hmmpanther:PTHR11749InterPro:IPR000056InterPro:IPR011060
InterPro:IPR013785InterPro:IPR026019KEGG:00030+5.1.3.1KEGG:00040+5.1.3.1KEGG:00710+5.1.3.1KEGG:ath:AT3G01850KO:K01783
OMA:IRSYNIKPANTHER:PTHR11749Pfam:PF00834PhylomeDB:Q94K13PIRSF:PIRSF001461PROSITE:PS01085PROSITE:PS01086
Proteomes:UP000006548Reactome:R-ATH-71336RefSeq:NP_566153.1RefSeq:NP_850495.1scanprosite:PS01085scanprosite:PS01086SMR:Q94K13
STRING:3702.AT3G01850.1SUPFAM:SSF51366TAIR:AT3G01850TIGRfam:TIGR01163TIGRFAMs:TIGR01163UniGene:At.18516UniProt:Q94K13
Coordinates (TAIR10) chr3:-:300428..301987
Molecular Weight (calculated) 24043.20 Da
IEP (calculated) 4.99
GRAVY (calculated) 0.05
Length 225 amino acids
Sequence (TAIR10)
(BLAST)
001: MVSPKIAPSM LSSDFANLAA EANRMIDLGA NWLHMDIMDG HFVPNLTIGA PVIESLRKHT NAYLDCHLMV TNPMDYVAQM AKAGASGFTF HVEVAQDNWQ
101: QLVEKIKSTG MRPGVALKPG TPVEQVYPLV EGTTPVEMVL VMTVEPGFGG QKFMPDMMDK VRALRQKYPT LDIQVDGGLG PSTIDTAAAA GANCIVAGSS
201: VFGAPEPGDV ISLLRTSVEK AQPTT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)