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AT3G01690.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.664
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G14390.1); Has 3903 Blast hits to 3890 proteins in 823 species: Archae - 8; Bacteria - 1296; Metazoa - 705; Fungi - 204; Plants - 316; Viruses - 6; Other Eukaryotes - 1368 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1073eggNOG:KOG1552EMBL:AC009325EMBL:AC010797EMBL:BT002425EMBL:BT008849EMBL:CP002686
EnsemblPlants:AT3G01690EnsemblPlants:AT3G01690.1entrez:821094ESTHER:arath-At3g01690Gene3D:3.40.50.1820GeneID:821094GO:GO:0016787
Gramene:AT3G01690.1hmmpanther:PTHR12277hmmpanther:PTHR12277:SF42HOGENOM:HOG000007142IntAct:Q9S7U7InterPro:IPR022742InterPro:IPR029058
KEGG:ath:AT3G01690MEROPS:S09.A20OMA:CHEKTRKPfam:PF12146Pfam:PF12695PhylomeDB:Q9S7U7Proteomes:UP000006548
RefSeq:NP_186818.1STRING:3702.AT3G01690.1SUPFAM:SSF53474TAIR:AT3G01690UniGene:At.24532UniProt:Q9S7U7
Coordinates (TAIR10) chr3:+:256753..258379
Molecular Weight (calculated) 41204.40 Da
IEP (calculated) 9.41
GRAVY (calculated) -0.58
Length 361 amino acids
Sequence (TAIR10)
(BLAST)
001: MGGVTSSVAA KFAFFPPSPP SYKVVTDELT GLLLLSPFPH RENVEIVKLR TRRGTEIVGM YVRHPMATST LLYSHGNAAD LGQMYELFIE LSIHLKVNLM
101: GYDYSGYGQS TGKPSEHNTY ADIEAVYKCL EETFGSKQEG VILYGQSVGS GPTLDLASRL PQLRAVVLHS PILSGLRVMY SVKKTYWFDI YKNIDKIPYV
201: DCPVLIIHGT SDEVVDCSHG KQLWELCKDK YEPLWVKGGN HCDLEHYPEY IRHLKKFIAT VERLPCPRMS SDQSERVRDA PPRRSMDRRV KPRQSTERRE
301: KEKPPKSQSK MSSSSSKLKI SFDQLDRSRR SVDCHEKTRK SVDQIERGRK SVDRLDRVRS E
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)