AT3G01670.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01680.1); Has 121 Blast hits to 111 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:247288..250261 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 94222.50 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.74 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.26 | ||||||||||||||||||||||||||||||||||||
| Length | 822 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAQRFQLNSQ TLPTADPLKR VSLIPRSAEQ RLADNAGERR PLAPRSHEDN PFGGHTDDHH VAAPADHNKV MDHNSENLGS IVPKTAHYPH PSEEILDANI 101: RHSMVPKSLG PNSLGGRFGP GKKQAFHRNG RPMFSLSDDR VMADRVLKTH SPDMIFFDVT SLLSVVNDIF KSHVPSIDSS APKPSLVFKD YADHTSFETF 201: ADLIDQISCE IDCKCLHGGE SHGMMTSGLH LDSRNTTTFS VLSLVSKYRW DAKLVLVLSA LAVKYGVFLL LAETHATNQL TKSLALIKQL PSIFSRQNAL 301: HQRLDKTRIL MQDMVDLTTT IIDIYQLPPN HITAAFTDHI PTAVYWIVRC VLICVSHISG ASGFKQDQIM SFMEVSEIHE NSERLRKINA YLLEQFKKSK 401: MTIEEGIIEE EYQELIQTFT TIIHVDVVPP LLRLLRPIDF LYHGAGVSKR RVGINVLTQK HVLLLISDLE NIEKELYILE SLYTEAWQQS FEILWVPVQD 501: FWTEADDAKF EALHMNMRWY VLGEPRKLRR AAIRFVREWW GFKNRPILVA LDPKGQVMST NAFPMVWIWQ PFAHPFTTAR ERDLWSEQEW NLEFLIDGTD 601: PHSLNQLVDG KYICLYGGED MQWIKNFTSL WRNVAKAANI QLEMVYVGKR NPKNGIQPII NTIREENLSH TLPDLFQIWF FWTRVESMWE SKQRMLKAHG 701: IKGREGFKEE EKDLVLQEVV AMLGYGGEGD GWGLVSKASD MMVRAKGNLF SRGLAEFNEW EVNIPTKGFL TALNDHLLMR LPPHHCTRFM LPETAGIIPN 801: EVECTECRRT MEKYYLYQCC LE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)