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AT3G01670.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.943
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01680.1); Has 121 Blast hits to 111 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JVZ8eggNOG:ENOG41105EZEMBL:AC009325EMBL:AY059845EMBL:BT008797EMBL:CP002686EMBL:HM162885
EnsemblPlants:AT3G01670EnsemblPlants:AT3G01670.1entrez:821096GeneID:821096Genevisible:Q93XX2GO:GO:0010088GO:GO:0042803
GO:GO:0043621Gramene:AT3G01670.1hmmpanther:PTHR33232hmmpanther:PTHR33232:SF5IntAct:Q93XX2InterPro:IPR027942InterPro:IPR027944
iPTMnet:Q93XX2KEGG:ath:AT3G01670OMA:PNEVECTPaxDb:Q93XX2Pfam:PF14576Pfam:PF14577Pfam:Q93XX2
PRO:PR:Q93XX2ProteinModelPortal:Q93XX2Proteomes:UP000006548RefSeq:NP_566145.1STRING:3702.AT3G01670.1TAIR:AT3G01670UniGene:At.18469
UniProt:Q93XX2
Coordinates (TAIR10) chr3:+:247288..250261
Molecular Weight (calculated) 94222.50 Da
IEP (calculated) 6.74
GRAVY (calculated) -0.26
Length 822 amino acids
Sequence (TAIR10)
(BLAST)
001: MAQRFQLNSQ TLPTADPLKR VSLIPRSAEQ RLADNAGERR PLAPRSHEDN PFGGHTDDHH VAAPADHNKV MDHNSENLGS IVPKTAHYPH PSEEILDANI
101: RHSMVPKSLG PNSLGGRFGP GKKQAFHRNG RPMFSLSDDR VMADRVLKTH SPDMIFFDVT SLLSVVNDIF KSHVPSIDSS APKPSLVFKD YADHTSFETF
201: ADLIDQISCE IDCKCLHGGE SHGMMTSGLH LDSRNTTTFS VLSLVSKYRW DAKLVLVLSA LAVKYGVFLL LAETHATNQL TKSLALIKQL PSIFSRQNAL
301: HQRLDKTRIL MQDMVDLTTT IIDIYQLPPN HITAAFTDHI PTAVYWIVRC VLICVSHISG ASGFKQDQIM SFMEVSEIHE NSERLRKINA YLLEQFKKSK
401: MTIEEGIIEE EYQELIQTFT TIIHVDVVPP LLRLLRPIDF LYHGAGVSKR RVGINVLTQK HVLLLISDLE NIEKELYILE SLYTEAWQQS FEILWVPVQD
501: FWTEADDAKF EALHMNMRWY VLGEPRKLRR AAIRFVREWW GFKNRPILVA LDPKGQVMST NAFPMVWIWQ PFAHPFTTAR ERDLWSEQEW NLEFLIDGTD
601: PHSLNQLVDG KYICLYGGED MQWIKNFTSL WRNVAKAANI QLEMVYVGKR NPKNGIQPII NTIREENLSH TLPDLFQIWF FWTRVESMWE SKQRMLKAHG
701: IKGREGFKEE EKDLVLQEVV AMLGYGGEGD GWGLVSKASD MMVRAKGNLF SRGLAEFNEW EVNIPTKGFL TALNDHLLMR LPPHHCTRFM LPETAGIIPN
801: EVECTECRRT MEKYYLYQCC LE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)