AT3G01630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.689 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Major facilitator superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Major facilitator superfamily protein; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G31470.1); Has 1265 Blast hits to 1241 proteins in 287 species: Archae - 34; Bacteria - 317; Metazoa - 7; Fungi - 163; Plants - 581; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:237270..238925 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 60637.90 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.23 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.46 | ||||||||||||||||||||||||||||
| Length | 551 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRKQPPSPPK PPRVNSMLQW WRRWTVLVAA IWIQAFTGTN FDFSAYSSDM KSSMGVSQSR LNYMAVASDL GKALGWSSGF AIAYFPVSGV LFAAAAMGLV 101: GYGVQWLSIA DVIDLPYSLV LVCCSLAGLS ICWFNTVSFI LCIRHFKANH SLALSLVVSF NGISAALYTL GHEAISGKSS ASSDIYLLLN SLIPLIVSVL 201: ALWPVLTNPN SSETDTTRTH DETRIFVVFN VLALVTCFYL LLPSSGTYLA SSPRWHFLGA IFLLLFPLCV PFLDYIHRAL ESCFHHHSSG YAAVNIEEPK 301: ILKIKSQKSN AEEESDQVRL GDEHSLGMLV RKLEFWLYYV AYFCGGTIGL VYSNNLGQIA QSLGQSSSNA KSLVTLFSAF SFLGRLLSSA PDFTRKKLKY 401: LTRTGWFTIS LLPTPLAFFI LAYSPKTNQT ALLEVATALI GLSSGFVFAA AVSITSELFG RNSVGVNQNI LITNIPIGSL FYGYMAGSVY DTNASLGRKS 501: VVADSVVCVG RKCYFVTFLF WGCLSVLGFV CSLFLFIRTR PVYHRLKLNR M |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)