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AT3G01630.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.838
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Major facilitator superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Major facilitator superfamily protein; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G31470.1); Has 1265 Blast hits to 1241 proteins in 287 species: Archae - 34; Bacteria - 317; Metazoa - 7; Fungi - 163; Plants - 581; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JUG5eggNOG:ENOG41106WWEMBL:CP002686EnsemblPlants:AT3G01630EnsemblPlants:AT3G01630.1entrez:819891GeneID:819891
GO:GO:0016021Gramene:AT3G01630.1hmmpanther:PTHR21576hmmpanther:PTHR21576:SF7InParanoid:F4J4R8InterPro:IPR010658InterPro:IPR020846
KEGG:ath:AT3G01630OMA:SAYSSDMPaxDb:F4J4R8Pfam:PF06813PRIDE:F4J4R8ProteinModelPortal:F4J4R8Proteomes:UP000006548
RefSeq:NP_186812.2SUPFAM:SSF103473TAIR:AT3G01630TMHMM:TMhelixUniGene:At.41248UniProt:F4J4R8
Coordinates (TAIR10) chr3:+:237270..238925
Molecular Weight (calculated) 60637.90 Da
IEP (calculated) 9.23
GRAVY (calculated) 0.46
Length 551 amino acids
Sequence (TAIR10)
(BLAST)
001: MRKQPPSPPK PPRVNSMLQW WRRWTVLVAA IWIQAFTGTN FDFSAYSSDM KSSMGVSQSR LNYMAVASDL GKALGWSSGF AIAYFPVSGV LFAAAAMGLV
101: GYGVQWLSIA DVIDLPYSLV LVCCSLAGLS ICWFNTVSFI LCIRHFKANH SLALSLVVSF NGISAALYTL GHEAISGKSS ASSDIYLLLN SLIPLIVSVL
201: ALWPVLTNPN SSETDTTRTH DETRIFVVFN VLALVTCFYL LLPSSGTYLA SSPRWHFLGA IFLLLFPLCV PFLDYIHRAL ESCFHHHSSG YAAVNIEEPK
301: ILKIKSQKSN AEEESDQVRL GDEHSLGMLV RKLEFWLYYV AYFCGGTIGL VYSNNLGQIA QSLGQSSSNA KSLVTLFSAF SFLGRLLSSA PDFTRKKLKY
401: LTRTGWFTIS LLPTPLAFFI LAYSPKTNQT ALLEVATALI GLSSGFVFAA AVSITSELFG RNSVGVNQNI LITNIPIGSL FYGYMAGSVY DTNASLGRKS
501: VVADSVVCVG RKCYFVTFLF WGCLSVLGFV CSLFLFIRTR PVYHRLKLNR M
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)