AT3G01620.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.401 vacuole 0.309 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : beta-1,4-N-acetylglucosaminyltransferase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT5G14480.1); Has 1193 Blast hits to 1193 proteins in 91 species: Archae - 0; Bacteria - 44; Metazoa - 58; Fungi - 34; Plants - 126; Viruses - 4; Other Eukaryotes - 927 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:235327..236729 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45321.60 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.76 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.35 | ||||||||||||||||||||||||||||||||||||||||
| Length | 388 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSDGYRSSKK TDTICEDVCG QEGSRAGKAI SRLRCVLRGL DFKTFLFLFT LLPLFIFGIY LHGQKITYFL RPLWESPPKP FNILPHYYHE NTSMELLCNL 101: HGWKLRESPR RVFDAALFSN EIDMLTLRWN ELNPYITQFV LLESNSTFTG LSKQLAFADN REKNFKFVEP RLTYGNVGGR FKKGENPFVE ESFQRLALDQ 201: LIKLAGIKED DLLIMSDVDE IPSGHTINLL RWCDGFPPIL HLQLRNYLYS YEYYVDSKSW RASVHLYKPG KTRCAHFRQS NNLLTDSGWH CSFCFRHIND 301: FVFKMKAYSH TDRVRFLHYL NPRRIQDIIC KGTDLFDMLP EEHTFREIIG KLGPIPRSYS AVHLPGYLIQ NADSYKYLLP GNCKRESG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)