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AT3G01260.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Galactose mutarotase-like superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Galactose mutarotase-like superfamily protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G15140.1); Has 6350 Blast hits to 6088 proteins in 1398 species: Archae - 6; Bacteria - 3037; Metazoa - 664; Fungi - 417; Plants - 287; Viruses - 26; Other Eukaryotes - 1913 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2017eggNOG:KOG1604EMBL:CP002686EnsemblPlants:AT3G01260EnsemblPlants:AT3G01260.1entrez:821171Gene3D:2.70.98.10
GeneID:821171GO:GO:0005975GO:GO:0016853GO:GO:0030246Gramene:AT3G01260.1gramene_pathway:5.1.3.3gramene_pathway:PWY-6317
hmmpanther:PTHR10091hmmpanther:PTHR10091:SF10InParanoid:F4J5Z7InterPro:IPR008183InterPro:IPR011013InterPro:IPR014718KEGG:ath:AT3G01260
KO:K01785OMA:KAYSGLCPaxDb:F4J5Z7Pfam:PF01263PRIDE:F4J5Z7ProteinModelPortal:F4J5Z7Proteomes:UP000006548
RefSeq:NP_186775.4SMR:F4J5Z7STRING:3702.AT3G01260.1SUPFAM:SSF74650TAIR:AT3G01260TMHMM:TMhelixUniGene:At.41305
UniProt:F4J5Z7
Coordinates (TAIR10) chr3:-:80244..82005
Molecular Weight (calculated) 47742.30 Da
IEP (calculated) 5.00
GRAVY (calculated) -0.83
Length 426 amino acids
Sequence (TAIR10)
(BLAST)
001: MVRISVLVCL VLLVTIGVMV SVSLADNNEE KSTDLKKFKG GVTDHSISKA NDNDHDDDDH DQDDDNDGDH DDDDHDDDND HDDDNNDHDD DDNNDDNNDG
101: DDDHDDDNND DGDDEKKTLR VHELKKGNLT VKFTNRGASI MSLLFPNING KLEDIVLGYD SVNDHMIDTV FCGVTLARVA SKKEKAAAND GKNTIHGGTK
201: ESSDVIWRVK KHKHNGKKPY IVFTYTTSPD GDQGKLEVTV TYKLVGENRL KMVMQAKAKE KTTPLNLVHR SYWNLGGHNN EDIFSEEIQI LGSGYTHLDD
301: NLTPTGKILA VKGTPFDFRQ LRPIKDNINE LKTGYGINYC LDGVANKMRK VVELVDNKSK IKMELSTDQS GLRLKTTKPK NGSVHKAYSG LCLESHAINY
401: QYRSSQIIEP GETYKHTMLF KFSFVP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)