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AT3G01040.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.920
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : galacturonosyltransferase 13
Curator
Summary (TAIR10)
Encodes a protein with putative galacturonosyltransferase activity.
Computational
Description (TAIR10)
galacturonosyltransferase 13 (GAUT13); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 14 (TAIR:AT5G15470.1); Has 1671 Blast hits to 1663 proteins in 335 species: Archae - 0; Bacteria - 670; Metazoa - 145; Fungi - 4; Plants - 816; Viruses - 2; Other Eukaryotes - 34 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1213-MONOMERCAZy:GT8EC:2.4.1.-eggNOG:ENOG410IJPU
eggNOG:ENOG410ZY1JEMBL:AC008261EMBL:AK226967EMBL:BT030321
EMBL:CP002686EnsemblPlants:AT3G01040EnsemblPlants:AT3G01040.1entrez:821312
ExpressionAtlas:Q0WV13Gene3D:3.90.550.10GeneID:821312Genevisible:Q0WV13
GO:GO:0000139GO:GO:0005794GO:GO:0009555GO:GO:0009860
GO:GO:0016021GO:GO:0047262GO:GO:0052325GO:GO:0090406
gramene_pathway:2.4.1.43gramene_pathway:PWY-1061hmmpanther:PTHR32116hmmpanther:PTHR32116:SF2
HOGENOM:HOG000239480InParanoid:Q0WV13InterPro:IPR002495InterPro:IPR029044
InterPro:IPR029993iPTMnet:Q0WV13KEGG:00051+2.4.1.-KEGG:00512+2.4.1.-
KEGG:00513+2.4.1.-KEGG:00514+2.4.1.-KEGG:00522+2.4.1.-KEGG:00533+2.4.1.-
KEGG:00540+2.4.1.-KEGG:00550+2.4.1.-KEGG:00561+2.4.1.-KEGG:00563+2.4.1.-
KEGG:00600+2.4.1.-KEGG:00601+2.4.1.-KEGG:00603+2.4.1.-KEGG:00604+2.4.1.-
KEGG:00906+2.4.1.-KEGG:00908+2.4.1.-KEGG:00941+2.4.1.-KEGG:00942+2.4.1.-
KEGG:00944+2.4.1.-KEGG:00945+2.4.1.-KEGG:00965+2.4.1.-KEGG:ath:AT3G01040
KO:K13648OMA:RTWRKTNPANTHER:PTHR32116PaxDb:Q0WV13
Pfam:PF01501Pfam:Q0WV13PhylomeDB:Q0WV13PRIDE:Q0WV13
PRO:PR:Q0WV13ProteinModelPortal:Q0WV13Proteomes:UP000006548RefSeq:NP_001118545.1
RefSeq:NP_186753.2SMR:Q0WV13STRING:3702.AT3G01040.1SUPFAM:SSF53448
TAIR:AT3G01040tair10-symbols:GAUT13TMHMM:TMhelixUniGene:At.24420
UniGene:At.72100UniPathway:UPA00845UniProt:Q0WV13
Coordinates (TAIR10) chr3:+:9392..11979
Molecular Weight (calculated) 61147.60 Da
IEP (calculated) 8.85
GRAVY (calculated) -0.19
Length 533 amino acids
Sequence (TAIR10)
(BLAST)
001: MQLHISPSMR SITISSSNEF IDLMKIKVAA RHISYRTLFH TILILAFLLP FVFILTAVVT LEGVNKCSSF DCFGRRLGPR LLGRIDDSEQ RLVRDFYKIL
101: NEVSTQEIPD GLKLPESFSQ LVSDMKNNHY DAKTFALVFR AMVEKFERDL RESKFAELMN KHFAASSIPK GIHCLSLRLT DEYSSNAHAR RQLPSPELLP
201: VLSDNAYHHF VLATDNILAA SVVVSSAVQS SSKPEKIVFH VITDKKTYAG MHSWFALNSV APAIVEVKSV HQFDWLTREN VPVLEAVESH NSIRNYYHGN
301: HIAGANLSET TPRTFASKLQ SRSPKYISLL NHLRIYLPEL FPNLDKVVFL DDDIVIQKDL SPLWDIDLNG KVNGAVETCR GEDVWVMSKR LRNYFNFSHP
401: LIAKHLDPEE CAWAYGMNIF DLRTWRKTNI RETYHSWLKE NLKSNLTMWK LGTLPPALIA FKGHVQPIDS SWHMLGLGYQ SKTNLENAKK AAVIHYNGQS
501: KPWLEIGFEH LRPFWTKYVN YSNDFIKNCH ILE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)