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AT2G48130.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.844
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 1201 Blast hits to 1197 proteins in 63 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 0; Plants - 1190; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JCV9eggNOG:ENOG4111902EMBL:AB246326EMBL:AY065446
EMBL:AY117278EMBL:CP002685EnsemblPlants:AT2G48130EnsemblPlants:AT2G48130.1
entrez:819425GeneID:819425GO:GO:0006869GO:GO:0008233
GO:GO:0008289GO:GO:0031225Gramene:AT2G48130.1hmmpanther:PTHR33044
hmmpanther:PTHR33044:SF23HOGENOM:HOG000240487InterPro:IPR000528InterPro:IPR016140
KEGG:ath:AT2G48130OMA:GEAQSNCPfam:PF14368PhylomeDB:Q7EB72
PIR:G84923PRINTS:PR00382Proteomes:UP000006548RefSeq:NP_566126.1
SMART:SM00499SMR:Q7EB72STRING:3702.AT2G48130.1SUPFAM:SSF47699
TAIR:AT2G48130UniGene:At.28652UniProt:Q7EB72
Coordinates (TAIR10) chr2:-:19685263..19685977
Molecular Weight (calculated) 18853.60 Da
IEP (calculated) 8.66
GRAVY (calculated) 0.13
Length 183 amino acids
Sequence (TAIR10)
(BLAST)
001: MGYRRSYAIT FVALVAALWS VTKAQPSSSC VSTLTTLSPC LSYITGNSTT PSQPCCSRLD SVIKSSPQCI CSAVNSPIPN IGLNINRTQA LQLPNACNIQ
101: TPPLTQCNAA TGPTAQPPAP SPTEKTPDVT LTPTSLPGAR SGVGGGSKTV PSVGTGSSSR NVDPLPLHFL MFAVLVVCTS SFL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)