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AT2G48010.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : receptor-like kinase in in flowers 3
Curator
Summary (TAIR10)
receptor-like serine/threonine kinase (RKF3)
Computational
Description (TAIR10)
receptor-like kinase in in flowers 3 (RKF3); FUNCTIONS IN: receptor signaling protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G11050.1); Has 112833 Blast hits to 111726 proteins in 4356 species: Archae - 97; Bacteria - 12546; Metazoa - 41926; Fungi - 9138; Plants - 32648; Viruses - 383; Other Eukaryotes - 16095 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G48010-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:KOG1187EMBL:AC006072EMBL:AF024650EMBL:AY037237
EMBL:BT000518EMBL:CP002685EMBL:Z84202EnsemblPlants:AT2G48010EnsemblPlants:AT2G48010.1entrez:819413Gene3D:2.60.120.200
GeneID:819413Genevisible:P93050GO:GO:0004674GO:GO:0004702GO:GO:0005524GO:GO:0005886GO:GO:0016021
GO:GO:0023014Gramene:AT2G48010.1hmmpanther:PTHR27006hmmpanther:PTHR27006:SF36HOGENOM:HOG000241452InParanoid:P93050IntAct:P93050
InterPro:IPR000719InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441iPTMnet:P93050
KEGG:ath:AT2G48010OMA:IVCDLMKPaxDb:P93050Pfam:P93050Pfam:PF07714Pfscan:PS50011PhylomeDB:P93050
PIR:C84922PRIDE:P93050PRO:PR:P93050PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:P93050
Proteomes:UP000006548RefSeq:NP_182322.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:P93050STRING:3702.AT2G48010.1
SUPFAM:SSF56112SwissPalm:P93050TAIR:AT2G48010tair10-symbols:RKF3TMHMM:TMhelixUniGene:At.221UniGene:At.67096
UniGene:At.68149UniProt:P93050
Coordinates (TAIR10) chr2:+:19641465..19643318
Molecular Weight (calculated) 67227.30 Da
IEP (calculated) 7.90
GRAVY (calculated) -0.05
Length 617 amino acids
Sequence (TAIR10)
(BLAST)
001: MLFLRRIAVV FFVFTSFSAA QNSTCPLDFS VLEPFRRPKP DGATTCQYLL QGLRLLYSHH LRQTGSFLPP PESAASCWAA LQSSVAGFLP RFDVRSTCGF
101: QTPWISQGCM DITTRSQFES LIPNSSLATT AMRCNTSLES NTPCASCTQS LSAFQPYLSG PSLGNVSDCA SFPSIYAAAF ANSLGPTDKG TAKCLFQLDL
201: ASPTSSGANK VKVLVSSFSV LLVASVLVIT AWFWYCRRKK SKLLKPRDTS LEAGTQSRLD SMSESTTLVK FSFDEIKKAT NNFSRHNIIG RGGYGNVFKG
301: ALPDGTQVAF KRFKNCSAGG DANFAHEVEV IASIRHVNLL ALRGYCTATT PYEGHQRIIV CDLVSNGSLH DHLFGDLEAQ LAWPLRQRIA LGMARGLAYL
401: HYGAQPSIIH RDIKASNILL DERFEAKVAD FGLAKFNPEG MTHMSTRVAG TMGYVAPEYA LYGQLTEKSD VYSFGVVLLE LLSRRKAIVT DEEGQPVSVA
501: DWAWSLVREG QTLDVVEDGM PEKGPPEVLE KYVLIAVLCS HPQLHARPTM DQVVKMLESN EFTVIAIPQR PIPLVACREE IDRSVSSSSG SGKLTSPTGY
601: QAFSFGGDGP SGNTNTT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)