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AT2G47880.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.468
endoplasmic reticulum 0.280
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Glutaredoxin family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G62960.1); Has 1229 Blast hits to 1227 proteins in 226 species: Archae - 0; Bacteria - 96; Metazoa - 226; Fungi - 100; Plants - 735; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink).
Protein Annotations
BioGrid:4735eggNOG:COG0695eggNOG:KOG1752EMBL:AC005309EMBL:AC006072EMBL:AK221443EMBL:AY086073
EMBL:BT025025EMBL:CP002685EMBL:FJ611909EnsemblPlants:AT2G47880EnsemblPlants:AT2G47880.1entrez:819400Gene3D:3.40.30.10
GeneID:819400Genevisible:O82255GO:GO:0005737GO:GO:0009055GO:GO:0015035GO:GO:0045454Gramene:AT2G47880.1
hmmpanther:PTHR10168hmmpanther:PTHR10168:SF57HOGENOM:HOG000095204InParanoid:O82255IntAct:O82255InterPro:IPR002109InterPro:IPR011905
InterPro:IPR012336InterPro:IPR014025KEGG:ath:AT2G47880OMA:RMGCSAPPaxDb:O82255Pfam:O82255Pfam:PF00462
Pfscan:PS51354PhylomeDB:O82255PIR:F84920PRIDE:O82255PRINTS:PR00160PRO:PR:O82255PROSITE:PS51354
ProteinModelPortal:O82255Proteomes:UP000006548RefSeq:NP_182309.1SMR:O82255STRING:3702.AT2G47880.1SUPFAM:SSF52833TAIR:AT2G47880
TIGRfam:TIGR02189TIGRFAMs:TIGR02189UniGene:At.27618UniProt:O82255
Coordinates (TAIR10) chr2:+:19605124..19605432
Molecular Weight (calculated) 11276.00 Da
IEP (calculated) 7.85
GRAVY (calculated) 0.29
Length 102 amino acids
Sequence (TAIR10)
(BLAST)
001: MDKVMRMSSE KGVVIFTKSS CCLCYAVQIL FRDLRVQPTI HEIDNDPDCR EIEKALLRLG CSTAVPAVFV GGKLVGSTNE VMSLHLSGSL VPLIKPYQSI
101: LY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)