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AT2G47490.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAD+ transporter 1
Curator
Summary (TAIR10)
Encodes a chloroplast-localized NAD+ transporter that transports NAD+ in a counter exchange mode with ADP and AMP in vitro.
Computational
Description (TAIR10)
NAD+ transporter 1 (NDT1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: NAD+ transporter 2 (TAIR:AT1G25380.1); Has 28896 Blast hits to 14510 proteins in 466 species: Archae - 0; Bacteria - 6; Metazoa - 12245; Fungi - 8541; Plants - 5076; Viruses - 8; Other Eukaryotes - 3020 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XS20eggNOG:KOG0757EMBL:AC002535EMBL:AF372957EMBL:AJ871011EMBL:AK316807EMBL:AY074833
EMBL:AY084889EMBL:CP002685EMBL:FM211595EnsemblPlants:AT2G47490EnsemblPlants:AT2G47490.1entrez:819362Gene3D:1.50.40.10
GeneID:819362Genevisible:O22261GO:GO:0003735GO:GO:0005739GO:GO:0006412GO:GO:0015297GO:GO:0016021
GO:GO:0031969GO:GO:0043132GO:GO:0051724Gramene:AT2G47490.1hmmpanther:PTHR24089hmmpanther:PTHR24089:SF393HOGENOM:HOG000188210
InParanoid:O22261InterPro:IPR002067InterPro:IPR018108InterPro:IPR023395KEGG:ath:AT2G47490KO:K15115OMA:FPTWMIY
PaxDb:O22261Pfam:O22261Pfam:PF00153Pfscan:PS50920PhylomeDB:O22261PIR:T00435PRIDE:O22261
PRINTS:PR00926PRO:PR:O22261PROSITE:PS50920ProteinModelPortal:O22261Proteomes:UP000006548RefSeq:NP_566102.1SMR:O22261
STRING:3702.AT2G47490.1SUPFAM:0048588SUPFAM:SSF103506TAIR:AT2G47490tair10-symbols:ATNDT1tair10-symbols:NDT1TCDB:2.A.29.10.11
TMHMM:TMhelixUniGene:At.19131UniProt:O22261
Coordinates (TAIR10) chr2:+:19487549..19489311
Molecular Weight (calculated) 33885.20 Da
IEP (calculated) 10.15
GRAVY (calculated) 0.09
Length 312 amino acids
Sequence (TAIR10)
(BLAST)
001: MSANSHPPNS KNVLCNAAAG AAAGVVAATF VCPLDVIKTR FQVHGLPKLG DANIKGSLIV GSLEQIFKRE GMRGLYRGLS PTVMALLSNW AIYFTMYDQL
101: KSFLCSNDHK LSVGANVLAA SGAGAATTIA TNPLWVVKTR LQTQGMRVGI VPYKSTFSAL RRIAYEEGIR GLYSGLVPAL AGISHVAIQF PTYEMIKVYL
201: AKKGDKSVDN LNARDVAVAS SIAKIFASTL TYPHEVVRAR LQEQGHHSEK RYSGVRDCIK KVFEKDGFPG FYRGCATNLL RTTPAAVITF TSFEMVHRFL
301: VTHIPSEQSS IL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)