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AT2G47270.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.913
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : sequence-specific DNA binding transcription factors;transcription regulators
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
sequence-specific DNA binding transcription factors;transcription regulators; Has 43 Blast hits to 43 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J2RGeggNOG:ENOG4111CN7EMBL:AB493596EMBL:AC002337EMBL:AY085979EMBL:BT024807EMBL:CP002685
EnsemblPlants:AT2G47270EnsemblPlants:AT2G47270.1entrez:819340GeneID:819340Genevisible:O22901GO:GO:0003677GO:GO:0003700
GO:GO:0005634GO:GO:0006351GO:GO:0006355GO:GO:0030154GO:GO:2000280Gramene:AT2G47270.1hmmpanther:PTHR33124
hmmpanther:PTHR33124:SF13HOGENOM:HOG000095224InParanoid:O22901InterPro:IPR011598KEGG:ath:AT2G47270OMA:IPINCEDPaxDb:O22901
Pfam:O22901Pfscan:PS50888PhylomeDB:O22901PIR:B84913PRIDE:O22901PRO:PR:O22901PROSITE:PS50888
ProteinModelPortal:O22901Proteomes:UP000006548RefSeq:NP_566098.1TAIR:AT2G47270tair10-symbols:UPB1UniGene:At.36386UniProt:O22901
Coordinates (TAIR10) chr2:-:19411741..19412049
Molecular Weight (calculated) 11880.00 Da
IEP (calculated) 11.72
GRAVY (calculated) -0.37
Length 102 amino acids
Sequence (TAIR10)
(BLAST)
001: MGVTLEGQRK ESIWVLMRRQ RARRALVKKI MIRPRKSVEA SRRPCRAIHR RVKTLKELVP NTKTSEGLDG LFRQTADYIL ALEMKVKVMQ TMVQVLTETN
101: CV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)