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AT2G47130.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.918
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : NAD(P)-binding Rossmann-fold superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G29260.1); Has 122340 Blast hits to 122121 proteins in 3572 species: Archae - 980; Bacteria - 79164; Metazoa - 5393; Fungi - 6725; Plants - 2704; Viruses - 5; Other Eukaryotes - 27369 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G47130-MONOMERBioGrid:4661EC:1.1.1.-eggNOG:COG1028eggNOG:KOG0725EMBL:AC004411EMBL:AK175374
EMBL:BT010410EMBL:CP002685EnsemblPlants:AT2G47130EnsemblPlants:AT2G47130.1entrez:819326Gene3D:3.40.50.720GeneID:819326
Genevisible:O80713GO:GO:0009626GO:GO:0016491GO:GO:0042742Gramene:AT2G47130.1hmmpanther:PTHR24322hmmpanther:PTHR24322:SF498
IntAct:O80713InterPro:IPR002347InterPro:IPR016040iPTMnet:O80713KEGG:ath:AT2G47130OMA:KITMINQPANTHER:PTHR24322
PaxDb:O80713Pfam:O80713Pfam:PF00106PhylomeDB:O80713PIR:T02175PRIDE:O80713PRINTS:PR00080
PRINTS:PR00081PRO:PR:O80713ProteinModelPortal:O80713Proteomes:UP000006548Reactome:R-ATH-2142700Reactome:R-ATH-70895RefSeq:NP_182235.1
SMR:O80713STRING:3702.AT2G47130.1SUPFAM:SSF51735TAIR:AT2G47130UniGene:At.43807UniGene:At.69627UniProt:O80713
Coordinates (TAIR10) chr2:-:19349627..19350481
Molecular Weight (calculated) 26902.20 Da
IEP (calculated) 7.04
GRAVY (calculated) 0.11
Length 257 amino acids
Sequence (TAIR10)
(BLAST)
001: MSGLRLDGKI AIITGGASGI GAEAVRLFTD HGAKVVIVDF QEELGQNVAV SVGKDKASFY RCDVTNEKEV ENAVKFTVEK YGKLDVLFSN AGVMEQPGSF
101: LDLNLEQFDR TMAVNVRGAA AFIKHAARAM VEKGTRGSIV CTTSVASEIG GPGPHAYTAS KHALLGLVKS ACGGLGKYGI RVNGVAPYAV ATAINSRDEE
201: TVRMVEEYSA ATGILKGVVL KARHVAEAAL FLASDDSAYV SGQNLAVDGG YSVVKPI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)