AT2G46960.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.920 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 709, subfamily B, polypeptide 1 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP709B | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 709, subfamily B, polypeptide 1 (CYP709B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 709, subfamily B, polypeptide 2 (TAIR:AT2G46950.1); Has 32280 Blast hits to 32204 proteins in 1668 species: Archae - 82; Bacteria - 5852; Metazoa - 11147; Fungi - 5837; Plants - 7783; Viruses - 3; Other Eukaryotes - 1576 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:19292295..19293765 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 46041.10 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.93 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||||||||||
| Length | 403 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLSNKLGFFV KSKARPEAVK LVGSKGLVFI EGADWVRHRR ILNPAFSIDR LKIMTTVMVD CTLKMLEEWR KESTKEETEH PKIKKEMNEE FQRLTADIIA 101: TSAFGSSYVE GIEVFRSQME LKRCYTTSLN QVSIPGTQYL PTPSNIRVWK LERKMDNSIK RIISSRLQSK SDYGDDLLGI LLKAYNTEGK ERKMSIEEII 201: HECRTFFFGG HETTSNLLAW TTMLLSLHQD WQEKLREEIF KECGKEKTPD SETFSKLKLM NMVIMESLRL YGPVSALARE ASVNIKLGDL EIPKGTTVVI 301: PLLKMHSDKT LWGSDADKFN PMRFANGVSR AANHPNALLA FSVGPRACIG QNFVMIEAKT VLTMILQRFR FISLCDEYKH TPVDNVTIQP QYGLPVMLQP 401: LED |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)