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AT2G46860.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : pyrophosphorylase 3
Curator
Summary (TAIR10)
Encodes a protein that might have inorganic pyrophosphatase activity.
Computational
Description (TAIR10)
pyrophosphorylase 3 (PPa3); FUNCTIONS IN: inorganic diphosphatase activity, pyrophosphatase activity; INVOLVED IN: phosphate metabolic process, metabolic process; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 1 (TAIR:AT1G01050.1); Has 5975 Blast hits to 5975 proteins in 1836 species: Archae - 171; Bacteria - 4302; Metazoa - 246; Fungi - 260; Plants - 270; Viruses - 0; Other Eukaryotes - 726 (source: NCBI BLink).
Protein Annotations
EC:3.6.1.1eggNOG:COG0221eggNOG:KOG1626EMBL:AC004411EMBL:AC005310EMBL:AK118094EMBL:BT025278
EMBL:CP002685EnsemblPlants:AT2G46860EnsemblPlants:AT2G46860.1entrez:819299Gene3D:3.90.80.10GeneID:819299Genevisible:O82793
GO:GO:0000287GO:GO:0004427GO:GO:0005737GO:GO:0006796Gramene:AT2G46860.1gramene_pathway:3.6.1.1gramene_pathway:PWYQT-4437
HAMAP:MF_00209hmmpanther:PTHR10286hmmpanther:PTHR10286:SF10HOGENOM:HOG000236472InterPro:IPR008162KEGG:00190+3.6.1.1KEGG:ath:AT2G46860
KO:K01507OMA:SCEERYLPANTHER:PTHR10286PaxDb:O82793Pfam:O82793Pfam:PF00719PhylomeDB:O82793
PIR:T02201PRIDE:O82793PRO:PR:O82793PROSITE:PS00387ProteinModelPortal:O82793Proteomes:UP000006548RefSeq:NP_182209.1
scanprosite:PS00387SMR:O82793STRING:3702.AT2G46860.1SUPFAM:SSF50324TAIR:AT2G46860tair10-symbols:AtPPa3tair10-symbols:PPa3
UniGene:At.36443UniProt:O82793
Coordinates (TAIR10) chr2:+:19253843..19255060
Molecular Weight (calculated) 24916.90 Da
IEP (calculated) 5.64
GRAVY (calculated) -0.45
Length 216 amino acids
Sequence (TAIR10)
(BLAST)
001: MSEEAYEETQ ESSQSPRPVP KLNERILSTL SRRSVAAHPW HDLEIGPEAP LVFNVVVEIT KGSKVKYELD KKTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDNDPLDVLV LMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCADDP EYKHFTDIKQ LAPHRLQEIR RFFEDYKKNE NKKVAVNDFL PSESAHEAIQ
201: YSMDLYAEYI LHTLRR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)