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AT2G46820.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : photosystem I P subunit
Curator
Summary (TAIR10)
Encodes the P subunit of Photosystem I. About 25% of the TMP14 pool appeared to be phosphorylated, and this ratio is not affected by light. Contains seven phosphorylation sites on threonine residue and chloroplast targeting signal. Located in the proximity of PSI-L, -H and -O subunits.
Computational
Description (TAIR10)
photosystem I P subunit (PSI-P); FUNCTIONS IN: DNA binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52220.1); Has 450 Blast hits to 450 proteins in 73 species: Archae - 0; Bacteria - 149; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink).
Protein Annotations
BioGrid:4630eggNOG:ENOG410IYI2eggNOG:ENOG4112195EMBL:AC005310EMBL:AY065156EMBL:AY086711EMBL:AY114583
EMBL:CP002685EnsemblPlants:AT2G46820EnsemblPlants:AT2G46820.1EnsemblPlants:AT2G46820.2entrez:819295GeneID:819295Genevisible:Q8LCA1
GO:GO:0003677GO:GO:0009295GO:GO:0009507GO:GO:0009508GO:GO:0009534GO:GO:0009535GO:GO:0009579
GO:GO:0009737GO:GO:0009773GO:GO:0009941GO:GO:0016021GO:GO:0030093Gramene:AT2G46820.1Gramene:AT2G46820.2
hmmpanther:PTHR33222hmmpanther:PTHR33222:SF9HOGENOM:HOG000239454InParanoid:Q8LCA1IntAct:Q8LCA1InterPro:IPR025564InterPro:IPR033344
iPTMnet:Q8LCA1KEGG:ath:AT2G46820MINT:MINT-8360530OMA:FAYKNLIPANTHER:PTHR33222PaxDb:Q8LCA1Pfam:PF14159
Pfam:Q8LCA1PhylomeDB:Q8LCA1PIR:T02683PRIDE:Q8LCA1PRO:PR:Q8LCA1Proteomes:UP000006548RefSeq:NP_001031551.1
RefSeq:NP_566086.1STRING:3702.AT2G46820.1TAIR:AT2G46820tair10-symbols:PSAPtair10-symbols:PSI-Ptair10-symbols:PTAC8tair10-symbols:TMP14
UniGene:At.20137UniGene:At.25160UniProt:Q8LCA1
Coordinates (TAIR10) chr2:+:19243729..19244870
Molecular Weight (calculated) 18483.10 Da
IEP (calculated) 8.19
GRAVY (calculated) 0.07
Length 174 amino acids
Sequence (TAIR10)
(BLAST)
001: MASLSVSSSS TIIDSRAPPS RLASASASSP SCISLPTLPI QSHTRAAKAT AYCRKIVRNV VTRATTEVGE APATTTEAET TELPEIVKTA QEAWEKVDDK
101: YAIGSLAFAG VVALWGSAGM ISAIDRLPLV PGVLELVGIG YTGWFTYKNL VFKPDREALF EKVKSTYKDI LGSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)