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AT2G46710.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.641
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Rho GTPase activating protein with PAK-box/P21-Rho-binding domain
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain; FUNCTIONS IN: Rac GTPase activator activity; INVOLVED IN: signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: Rho GTPase activating protein with PAK-box/P21-Rho-binding domain (TAIR:AT4G03100.1); Has 3093 Blast hits to 3092 proteins in 169 species: Archae - 0; Bacteria - 0; Metazoa - 2259; Fungi - 327; Plants - 185; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink).
Protein Annotations
BioGrid:4618eggNOG:ENOG410XRR2eggNOG:KOG4270EMBL:AC005819EMBL:AK117311EMBL:BT005369EMBL:CP002685
EnsemblPlants:AT2G46710EnsemblPlants:AT2G46710.1entrez:819283Gene3D:1.10.555.10Gene3D:3.90.810.10GeneID:819283Genevisible:Q8GYY5
GO:GO:0005096GO:GO:0005886GO:GO:0007165GO:GO:0007275GO:GO:0009531GO:GO:0009664Gramene:AT2G46710.1
hmmpanther:PTHR23177hmmpanther:PTHR23177:SF24HOGENOM:HOG000238683InParanoid:Q8GYY5InterPro:IPR000095InterPro:IPR000198InterPro:IPR008936
KEGG:ath:AT2G46710OMA:DNGKEEHPaxDb:Q8GYY5Pfam:PF00620Pfam:PF00786Pfam:Q8GYY5Pfscan:PS50238
PhylomeDB:Q8GYY5PIR:C84906PRIDE:Q8GYY5PRO:PR:Q8GYY5PROSITE:PS50238ProteinModelPortal:Q8GYY5Proteomes:UP000006548
RefSeq:NP_850458.1SMART:SM00285SMART:SM00324SMR:Q8GYY5STRING:3702.AT2G46710.1SUPFAM:SSF48350TAIR:AT2G46710
UniGene:At.36471UniProt:Q8GYY5
Coordinates (TAIR10) chr2:+:19192105..19194656
Molecular Weight (calculated) 50785.20 Da
IEP (calculated) 6.11
GRAVY (calculated) -0.49
Length 455 amino acids
Sequence (TAIR10)
(BLAST)
001: MTNFSRSKST GTIGFPEFKP TRPGPDKYEN IHNDDDEYEE GHSTTSTDYY DASTPLSSHA SRSGNGSGSG QLTVVDLLAA VLRKSLVMSC AMERGEDDVV
101: ASMDIGWPTE VKHVSHVTFD RFNGFLGLPS ELEPEVPPRA PSASVSVFGV SAKSMQCSYD DRGNSVPTIL LRMQKRLYTE GGLKAEGIFR INPDNGKEEH
201: VRRQLNCGVV PRGIDVHCLA GLIKAWFREL PTGVLDVLTP EQVMRCNTEE DCSRLVILLP PVESAILDWA IGLMADVVEH EQFNKMNARN VAMVFAPNMT
301: QMADPLTALI HAVQVMNFLK TLILMNLKER ENADAKARWL KKQTSDPSEE WESQHSEILS PEKPNNNNPK FLRVATLCRL EADNEEEFWN IKKRNDHEGV
401: LDTSSGNGNI GPVQRLCKHP LFQLSKSTKK AFVSNRDEGR KGREAWSSRL SSLPW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)