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AT2G46660.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 0.553
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 78, subfamily A, polypeptide 6
Curator
Summary (TAIR10)
member of CYP78A
Computational
Description (TAIR10)
cytochrome P450, family 78, subfamily A, polypeptide 6 (CYP78A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome p450 78a9 (TAIR:AT3G61880.2); Has 32637 Blast hits to 32519 proteins in 1695 species: Archae - 48; Bacteria - 3588; Metazoa - 11617; Fungi - 7095; Plants - 9209; Viruses - 3; Other Eukaryotes - 1077 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G46660-MONOMEREC:1.14.-.-eggNOG:COG2124eggNOG:KOG0156EMBL:AC005819EMBL:AC006418EMBL:AK226763
EMBL:CP002685EnsemblPlants:AT2G46660EnsemblPlants:AT2G46660.1entrez:819278Gene3D:1.10.630.10GeneID:819278Genevisible:Q9ZNR0
GO:GO:0005506GO:GO:0016020GO:GO:0016021GO:GO:0016709GO:GO:0020037GO:GO:0040008GO:GO:0044550
GO:GO:0048316Gramene:AT2G46660.1hmmpanther:PTHR24298hmmpanther:PTHR24298:SF46HOGENOM:HOG000218628InParanoid:Q9ZNR0InterPro:IPR001128
InterPro:IPR002401InterPro:IPR017972KEGG:ath:AT2G46660OMA:HEFEWGPPaxDb:Q9ZNR0Pfam:PF00067Pfam:Q9ZNR0
PhylomeDB:Q9ZNR0PIR:F84905PRIDE:Q9ZNR0PRINTS:PR00385PRINTS:PR00463PRO:PR:Q9ZNR0PROSITE:PS00086
ProteinModelPortal:Q9ZNR0Proteomes:UP000006548RefSeq:NP_182189.1scanprosite:PS00086SMR:Q9ZNR0STRING:3702.AT2G46660.1SUPFAM:SSF48264
TAIR:AT2G46660tair10-symbols:CYP78A6TMHMM:TMhelixUniGene:At.36480UniProt:Q9ZNR0
Coordinates (TAIR10) chr2:-:19153602..19155417
Molecular Weight (calculated) 59568.40 Da
IEP (calculated) 8.29
GRAVY (calculated) -0.03
Length 530 amino acids
Sequence (TAIR10)
(BLAST)
001: MATKLESSLI FALLSKCSVL SQTNLAFSLL AVTIIWLAIS LFLWTYPGGP AWGKYLFGRL ISGSYKTGNV IPGPKGFPLV GSMSLMSSTL AHRRIADAAE
101: KFGAKRLMAF SLGETRVIVT CNPDVAKEIL NSPVFADRPV KESAYSLMFN RAIGFAPHGV YWRTLRRIAS NHLFSTKQIR RAETQRRVIS SQMVEFLEKQ
201: SSNEPCFVRE LLKTASLNNM MCSVFGQEYE LEKNHVELRE MVEEGYDLLG TLNWTDHLPW LSEFDPQRLR SRCSTLVPKV NRFVSRIISE HRNQTGDLPR
301: DFVDVLLSLH GSDKLSDPDI IAVLWEMIFR GTDTVAVLIE WILARMVLHP DMQSTVQNEL DQVVGKSRAL DESDLASLPY LTAVVKEVLR LHPPGPLLSW
401: ARLAITDTIV DGRLVPAGTT AMVNMWAVSH DPHVWVDPLE FKPERFVAKE GEVEFSVLGS DLRLAPFGSG RRICPGKNLG FTTVMFWTAM MLHEFEWGPS
501: DGNGVDLSEK LRLSCEMANP LPAKLRRRRS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)