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AT2G46270.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : G-box binding factor 3
Curator
Summary (TAIR10)
encodes a bZIP G-box binding protein whose expression is induced by ABA. It has been shown to bind to Adh that contains the G-box and is induced by cold and water deprivation. GBF3 has been shown to be expressed mostly in the root and dark-grown leaves. GBF3 can act as homodimers and as heterodimers with GFB1, GBF2 and GBF4. In addition, GBF3??s DNA binding activity is enhanced by GIP1, GPRI1 and GPRI2.
Computational
Description (TAIR10)
G-box binding factor 3 (GBF3); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 2 (TAIR:AT4G01120.1); Has 2267 Blast hits to 2266 proteins in 215 species: Archae - 0; Bacteria - 77; Metazoa - 736; Fungi - 40; Plants - 1305; Viruses - 8; Other Eukaryotes - 101 (source: NCBI BLink).
Protein Annotations
BioGrid:4570eggNOG:ENOG410IKJKeggNOG:ENOG410Y53YEMBL:AC005397EMBL:AF370307EMBL:AY063093EMBL:CP002685
EMBL:U17891EMBL:U51850EMBL:X63896EnsemblPlants:AT2G46270EnsemblPlants:AT2G46270.1entrez:819235ExpressionAtlas:P42776
GeneID:819235Genevisible:P42776GO:GO:0003700GO:GO:0005634GO:GO:0005829GO:GO:0006351GO:GO:0009737
GO:GO:0043565GO:GO:0044212hmmpanther:PTHR22952hmmpanther:PTHR22952:SF144HOGENOM:HOG000238141InParanoid:P42776IntAct:P42776
InterPro:IPR004827InterPro:IPR012900KEGG:ath:AT2G46270KO:K09060ncoils:CoilOMA:NKLMENSPaxDb:P42776
Pfam:P42776Pfam:PF00170Pfam:PF07777Pfam:PF16596Pfscan:PS50217PhylomeDB:P42776PIR:G84900
PIR:S20885PRIDE:P42776PRO:PR:P42776PROSITE:PS00036PROSITE:PS50217ProteinModelPortal:P42776Proteomes:UP000006548
RefSeq:NP_182150.1scanprosite:PS00036SMART:SM00338SMR:P42776STRING:3702.AT2G46270.1SUPFAM:SSF57959TAIR:AT2G46270
tair10-symbols:GBF3UniGene:At.19966UniProt:P42776
Coordinates (TAIR10) chr2:+:19000859..19002901
Molecular Weight (calculated) 41116.00 Da
IEP (calculated) 9.71
GRAVY (calculated) -0.95
Length 382 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNSSEEPKP PTKSDKPSSP PVDQTNVHVY PDWAAMQAYY GPRVAMPPYY NSAMAASGHP PPPYMWNPQH MMSPYGAPYA AVYPHGGGVY AHPGIPMGSL
101: PQGQKDPPLT TPGTLLSIDT PTKSTGNTDN GLMKKLKEFD GLAMSLGNGN PENGADEHKR SRNSSETDGS TDGSDGNTTG ADEPKLKRSR EGTPTKDGKQ
201: LVQASSFHSV SPSSGDTGVK LIQGSGAILS PGVSANSNPF MSQSLAMVPP ETWLQNEREL KRERRKQSNR ESARRSRLRK QAETEELARK VEALTAENMA
301: LRSELNQLNE KSDKLRGANA TLLDKLKCSE PEKRVPANML SRVKNSGAGD KNKNQGDNDS NSTSKLHQLL DTKPRAKAVA AG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)