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AT2G46190.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mitochondrial glycoprotein family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Mitochondrial glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrial matrix; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT2G39795.1); Has 64 Blast hits to 64 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AC005397EMBL:CP002685EnsemblPlants:AT2G46190EnsemblPlants:AT2G46190.1entrez:819226GeneID:819226GO:GO:0005759
Gramene:AT2G46190.1hmmpanther:PTHR10826hmmpanther:PTHR10826:SF4HOGENOM:HOG000237489InterPro:IPR003428KEGG:ath:AT2G46190OMA:GINPYTI
PhylomeDB:O82350PIR:G84899Proteomes:UP000006548RefSeq:NP_182142.1SUPFAM:SSF54529TAIR:AT2G46190UniGene:At.53136
UniProt:O82350
Coordinates (TAIR10) chr2:+:18971799..18972804
Molecular Weight (calculated) 23929.80 Da
IEP (calculated) 7.75
GRAVY (calculated) -0.16
Length 210 amino acids
Sequence (TAIR10)
(BLAST)
001: MVFAWCRSAS KLASVCGRFL SISAVVSLAP PRPMVSRGFL SSTAIDDRQS SNQMFLYMLC SGFIPPKVDD EPTPGINPYT IEDDGGKTVT LTRDYQEEYI
101: VVVAGMPYEE YDGLCFPLTV NFTKKISGLS LEFRCTAFPL NGTSMNGVSV ISRGNYWEDQ RPCDLNVDYR HSYLRMIFDY SPKFALYKYM TTGTRKYVVW
201: LKHLKKFLEE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)