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AT2G45990.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 312 Blast hits to 312 proteins in 90 species: Archae - 0; Bacteria - 131; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
Protein Annotations
DNASU:819207eggNOG:ENOG410IJ1EeggNOG:ENOG410XT6IEMBL:AC004665
EMBL:AC005397EMBL:AK316848EMBL:AY050790EMBL:AY114058
EMBL:CP002685EnsemblPlants:AT2G45990EnsemblPlants:AT2G45990.1EnsemblPlants:AT2G45990.2
entrez:819207ExpressionAtlas:O82790Gene3D:3.40.50.1000GeneID:819207
GO:GO:0009507GO:GO:0009570Gramene:AT2G45990.1Gramene:AT2G45990.2
hmmpanther:PTHR15157HOGENOM:HOG000233205InterPro:IPR023214OMA:DWGYNTQ
PhylomeDB:O82790PIR:T02448Proteomes:UP000006548RefSeq:NP_566060.1
RefSeq:NP_850443.1STRING:3702.AT2G45990.1SUPFAM:SSF56784TAIR:AT2G45990
UniGene:At.24763UniGene:At.64490UniProt:O82790
Coordinates (TAIR10) chr2:+:18919402..18921043
Molecular Weight (calculated) 30114.30 Da
IEP (calculated) 4.80
GRAVY (calculated) -0.09
Length 268 amino acids
Sequence (TAIR10)
(BLAST)
001: MGDLYALDFD GVLCDSCGES SLSAVKAAKV RWPDLFEGVD SALEEWIVDQ MHIVRPVVET GYENLLLVRL LLETKIPSIR KSSVAEGLTV DGILESWAKF
101: KPVIMEAWDE DRDALVDLFG KVRDDWINKD LTTWIGANRF YPGVSDALKF ASSKIYIVTT KQGRFAEALL REIAGVIIPS ERIYGLGSGP KVEVLKLLQD
201: KPEHQGLTLH FVEDRLATLK NVIKEPELDK WSLYLGTWGY NTEKERAEAA GIPRIQVIEL STFSNKLK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)