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AT2G45970.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.553
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 86, subfamily A, polypeptide 8
Curator
Summary (TAIR10)
Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems.
Computational
Description (TAIR10)
cytochrome P450, family 86, subfamily A, polypeptide 8 (CYP86A8); FUNCTIONS IN: alkane 1-monooxygenase activity, oxygen binding; INVOLVED IN: fatty acid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 86, subfamily A, polypeptide 4 (TAIR:AT1G01600.1); Has 27979 Blast hits to 27896 proteins in 1493 species: Archae - 44; Bacteria - 2538; Metazoa - 10315; Fungi - 6189; Plants - 7925; Viruses - 3; Other Eukaryotes - 965 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT2G45970-MONOMEREC:1.14.14.1eggNOG:COG2124eggNOG:KOG0157EMBL:AC004665EMBL:AJ301678EMBL:AY064966
EMBL:BT002239EMBL:CP002685EnsemblPlants:AT2G45970EnsemblPlants:AT2G45970.1entrez:819205Gene3D:1.10.630.10GeneID:819205
Genevisible:O80823GO:GO:0005506GO:GO:0006631GO:GO:0016021GO:GO:0018685GO:GO:0020037GO:GO:0070330
Gramene:AT2G45970.1gramene_pathway:1.14.13.-gramene_pathway:2.7.7.-gramene_pathway:PWY-1121gramene_pathway:PWY-321gramene_pathway:PWY-5129hmmpanther:PTHR24296
hmmpanther:PTHR24296:SF9HOGENOM:HOG000237580InParanoid:O80823InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972KEGG:ath:AT2G45970
KO:K15398OMA:LVNVHERPaxDb:O80823Pfam:O80823Pfam:PF00067PhylomeDB:O80823PIR:T02450
PRIDE:O80823PRINTS:PR00385PRINTS:PR00463PRO:PR:O80823PROSITE:PS00086ProteinModelPortal:O80823Proteomes:UP000006548
RefSeq:NP_182121.1scanprosite:PS00086SMR:O80823STRING:3702.AT2G45970.1SUPFAM:SSF48264TAIR:AT2G45970tair10-symbols:CYP86A8
tair10-symbols:LCRTMHMM:TMhelixUniGene:At.28599UniProt:O80823
Coordinates (TAIR10) chr2:-:18912548..18914161
Molecular Weight (calculated) 60919.80 Da
IEP (calculated) 7.98
GRAVY (calculated) -0.09
Length 537 amino acids
Sequence (TAIR10)
(BLAST)
001: MEISTALMIL SAITAYFLWL TFISRCLKGP RVWPILGSLP GLIENCERMH DWISDNLRAC SGTYQTCICA IPFLAKKQGL VTVTCDPRNL EHILKNRFDN
101: YPKGPTWQAV FHDLLGQGIF NSDGDTWLFQ RKTAALEFTT RTLRQAMARW VNRAIKLRFL PILENARLGS EPIDLQDLLL RLTFDNICGL TFGKDPRTCA
201: PGLPVNTFAV AFDRATEASL QRFILPEILW KFKRWLRLGL EVSLTRSLVQ VDNYLSEIIT TRKEEMMTQH NNGKHHDDLL SRFIKKKESY SDETLQRVAL
301: NFILAGRDTS SVALSWFFWL ITQHPAIEDK ILREICTVLV ETRGDDVALW TDEPLSCEEL DRLVFLKAAL SETLRLYPSV PEDSKRAVKD DVLPDGTFVP
401: AGSSITYSIY SAGRMKSTWG EDCLEFKPER WISQSDGGRF INHDPFKFVA FNAGPRICLG KDLAYLQMKS IASAVLLRHR LTVVTGHKVE QKMSLTLFMK
501: YGLLVNVHER DLTAIAADLR ECKSNVVNDG VGNGVSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)