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AT2G45600.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.870
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G45610.1); Has 9264 Blast hits to 9243 proteins in 1540 species: Archae - 114; Bacteria - 5273; Metazoa - 690; Fungi - 865; Plants - 1337; Viruses - 3; Other Eukaryotes - 982 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G45600-MONOMEREC:3.1.1.1eggNOG:COG0657eggNOG:KOG1515EMBL:AC003680EMBL:AY058862EMBL:AY087590
EMBL:BT020409EMBL:CP002685EnsemblPlants:AT2G45600EnsemblPlants:AT2G45600.1entrez:819168ESTHER:arath-CXE8Gene3D:3.40.50.1820
GeneID:819168Genevisible:O64640GO:GO:0052689Gramene:AT2G45600.1hmmpanther:PTHR23024hmmpanther:PTHR23024:SF113HOGENOM:HOG000152323
InParanoid:O64640InterPro:IPR002168InterPro:IPR013094InterPro:IPR029058KEGG:ath:AT2G45600MEROPS:S09.A07OMA:LWARPHA
PaxDb:O64640Pfam:O64640Pfam:PF07859PhylomeDB:O64640PIR:T00873PRIDE:O64640PRO:PR:O64640
PROSITE:PS01173ProteinModelPortal:O64640Proteomes:UP000006548RefSeq:NP_566047.1scanprosite:PS01173SMR:O64640STRING:3702.AT2G45600.1
SUPFAM:SSF53474TAIR:AT2G45600UniGene:At.19456UniGene:At.23647UniProt:O64640
Coordinates (TAIR10) chr2:+:18789799..18790788
Molecular Weight (calculated) 36426.30 Da
IEP (calculated) 6.42
GRAVY (calculated) -0.40
Length 329 amino acids
Sequence (TAIR10)
(BLAST)
001: MEAPPPSSDP YKFLNITLNS DGSLTRHRDF PKLPPTEQSK DIPLNQTNNT FIRIFKPRNI PPESKLPILV YFHGGGFILY SAASAPFHES CTKMADRLQT
101: IILSVEYRLA PEHRLPAAYE DAVEAILWLR DQARGPINGG DCDTWLKDGV DFSKCYVMGS SSGGNIVYNV ALRVVDTDLS PVKIQGLIMN QAFFGGVEPS
201: DSESRLKDDK ICPLPATHLL WSLCLPDGVD RDHVYSNPIK SSGPQEKDKM GRFPSTLING YGGDPLVDRQ RHVAEMLKGR GVHVETRFDK DGFHACELFD
301: GNKAKALYET VEAFMKSCSS TGPSSNSNM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)