suba logo
AT2G45570.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
endoplasmic reticulum 0.784
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 76, subfamily C, polypeptide 2
Curator
Summary (TAIR10)
member of CYP76C
Computational
Description (TAIR10)
cytochrome P450, family 76, subfamily C, polypeptide 2 (CYP76C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 34313 Blast hits to 34043 proteins in 1718 species: Archae - 48; Bacteria - 4021; Metazoa - 12101; Fungi - 7308; Plants - 9587; Viruses - 3; Other Eukaryotes - 1245 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G45570-MONOMEREC:1.14.-.-eggNOG:COG2124eggNOG:KOG0156EMBL:AB047809EMBL:AC003680EMBL:AY062600
EMBL:AY114660EMBL:CP002685EnsemblPlants:AT2G45570EnsemblPlants:AT2G45570.1entrez:819165Gene3D:1.10.630.10GeneID:819165
Genevisible:O64637GO:GO:0005506GO:GO:0016020GO:GO:0016021GO:GO:0016709GO:GO:0020037GO:GO:0044550
Gramene:AT2G45570.1hmmpanther:PTHR24298hmmpanther:PTHR24298:SF174HOGENOM:HOG000218628InParanoid:O64637InterPro:IPR001128InterPro:IPR002401
InterPro:IPR017972KEGG:ath:AT2G45570PaxDb:O64637Pfam:O64637Pfam:PF00067PhylomeDB:O64637PIR:T00870
PRIDE:O64637PRINTS:PR00385PRINTS:PR00463PRO:PR:O64637PROSITE:PS00086ProteinModelPortal:O64637Proteomes:UP000006548
RefSeq:NP_182081.1scanprosite:PS00086SMR:O64637STRING:3702.AT2G45570.1SUPFAM:SSF48264TAIR:AT2G45570tair10-symbols:CYP76C2
TMHMM:TMhelixUniGene:At.27289UniProt:O64637
Coordinates (TAIR10) chr2:-:18779935..18781922
Molecular Weight (calculated) 57259.90 Da
IEP (calculated) 6.96
GRAVY (calculated) -0.12
Length 512 amino acids
Sequence (TAIR10)
(BLAST)
001: MDIIFEQALF PLFCFVLSFF IIFFTTTRPR SSRKVVPSPP GPPRLPIIGN IHLVGRNPHH SFADLSKTYG PIMSLKFGSL NTVVVTSPEA AREVLRTYDQ
101: ILSSRTPTNS IRSINHDKVS VVWLPPSSSR WRLLRKLSAT QLFSPQRIEA TKTLRENKVK ELVSFMSESS EREEAVDISR ATFITALNII SNILFSVDLG
201: NYDSNKSGVF QDTVIGVMEA VGNPDAANFF PFLGFLDLQG NRKTLKACSE RLFKVFRGFI DAKLAEKSLR DTNSKDVRER DFVDVLLDLT EGDEAELNTN
301: DIVHLLLDLF GAGTDTNSST VEWAMAELLR NPETMVKAQA EIDCVIGQKG VVEESDISAL PYLQAVVKET FRLHPAAPLL VPRKAESDVE VLGFMVPKDT
401: QVFVNVWAIG RDPNVWENSS RFKPERFLGK DIDLRGRDYE LTPFGAGRRI CPGLPLAVKT VPLMLASLLY SFDWKLPNGV GSEDLDMDET FGLTLHKTNP
501: LHAVPVKKRG RN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)