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AT2G45200.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 1.000
ASURE: golgi
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : golgi snare 12
Curator
Summary (TAIR10)
Encodes a member of the GOS1 (Golgi SNARE) gene family.
Computational
Description (TAIR10)
golgi snare 12 (GOS12); FUNCTIONS IN: SNARE binding; INVOLVED IN: cellular membrane fusion, intra-Golgi vesicle-mediated transport; LOCATED IN: cytosol, integral to membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: golgi snare 11 (TAIR:AT1G15880.1); Has 416 Blast hits to 416 proteins in 175 species: Archae - 0; Bacteria - 4; Metazoa - 145; Fungi - 132; Plants - 101; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT2G45200EnsemblPlants:AT2G45200.1entrez:819128hmmpanther:PTHR21094ncoils:CoilPfam:PF12352tair10-symbols:ATGOS12
tair10-symbols:GOS12TMHMM:TMhelix
Coordinates (TAIR10) chr2:-:18637689..18639640
Molecular Weight (calculated) 26471.70 Da
IEP (calculated) 9.64
GRAVY (calculated) -0.32
Length 239 amino acids
Sequence (TAIR10)
(BLAST)
001: MTESSLDLQE SGWEELRREA RKIEGDLDVK LSSYAKLGAR FTQGGYVDTG SPTVGSGRSW KSMEMEIQSL LEKLLDINDS MSRCAASAAP TTSVTQKLAR
101: HRDILHEYTQ EFRRIKGNIN SLREHAELLS SVRDDISEYK ASGSMSPGVQ VLRERASIHG SISHIDDVIG QAQATRAVLG SQRSLFSDVQ GKVKNLGDKF
201: PVIRGLLGSI KRKRSRDTLI LSAVIAACTL FLIIYWLSK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)