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AT2G45150.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytidinediphosphate diacylglycerol synthase 4
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
cytidinediphosphate diacylglycerol synthase 4 (CDS4); CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374); BEST Arabidopsis thaliana protein match is: cytidinediphosphate diacylglycerol synthase 5 (TAIR:AT3G60620.1); Has 7499 Blast hits to 7494 proteins in 2620 species: Archae - 2; Bacteria - 5196; Metazoa - 180; Fungi - 137; Plants - 143; Viruses - 0; Other Eukaryotes - 1841 (source: NCBI BLink).
Protein Annotations
EC:2.7.7.41eggNOG:COG0575eggNOG:KOG1440EMBL:AK316876EMBL:AY050778EMBL:BT026467EMBL:BX822071
EMBL:CP002685EnsemblPlants:AT2G45150EnsemblPlants:AT2G45150.1EnsemblPlants:AT2G45150.2EnsemblPlants:AT2G45150.3entrez:819123ExpressionAtlas:Q94A03
GeneID:819123Genevisible:Q94A03GO:GO:0004605GO:GO:0006655GO:GO:0009535GO:GO:0016021GO:GO:0016024
GO:GO:0031969gramene_pathway:2.7.7.41gramene_pathway:PWY-5667gramene_pathway:PWY0-1319hmmpanther:PTHR13773hmmpanther:PTHR13773:SF3HOGENOM:HOG000006169
InterPro:IPR000374KEGG:00564+2.7.7.41KEGG:04070+2.7.7.41KEGG:ath:AT2G45150OMA:LCIWAADPaxDb:Q94A03Pfam:PF01148
PhylomeDB:Q94A03PRO:PR:Q94A03PROSITE:PS01315ProteinModelPortal:Q94A03Proteomes:UP000006548RefSeq:NP_566035.2RefSeq:NP_973691.2
RefSeq:NP_973692.1scanprosite:PS01315SMR:Q94A03STRING:3702.AT2G45150.1TAIR:AT2G45150tair10-symbols:CDS4TMHMM:TMhelix
UniGene:At.14606UniPathway:UPA00557UniProt:F4IW27UniProt:Q94A03
Coordinates (TAIR10) chr2:+:18613402..18615347
Molecular Weight (calculated) 46776.40 Da
IEP (calculated) 10.15
GRAVY (calculated) 0.38
Length 430 amino acids
Sequence (TAIR10)
(BLAST)
001: MTNTNTLFLR HDDDSEILIF QENSVFPLFV FASWGIWRAM ATFAELVLST SRCTCPCRSF TRKPLIRPPL SGLRLPGDTK PLFRSGLGRI SVSRRFLTAV
101: ARAESDQLGD DDHSKGIDRI HNLQNVEDKQ KKASQLKKRV IFGIGIGLPV GCVVLAGGWV FTVALASSVF IGSREYFELV RSRGIAKGMT PPPRYVSRVC
201: SVICALMPIL TLYFGNIDIL VTSAAFVVAI ALLVQRGSPR FAQLSSTMFG LFYCGYLPSF WVKLRCGLAA PALNTGIGRT WPILLGGQAH WTVGLVATLI
301: SFSGVIATDT FAFLGGKTFG RTPLTSISPK KTWEGTIVGL VGCIAITILL SKYLSWPQSL FSSVAFGFLN FFGSVFGDLT ESMIKRDAGV KDSGSLIPGH
401: GGILDRVDSY IFTGALAYSF IKTSLKLYGV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)