AT2G45060.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Uncharacterised conserved protein UCP022280 | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Uncharacterised conserved protein UCP022280; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022280 (InterPro:IPR016803); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP022280 (TAIR:AT4G26410.1); Has 86 Blast hits to 86 proteins in 26 species: Archae - 0; Bacteria - 7; Metazoa - 5; Fungi - 2; Plants - 71; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr2:-:18584674..18586688 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 30339.20 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.94 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.46 | ||||||||||||||||||||||||||||
| Length | 272 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAALGESSSS EMDNAKSPEI QQSSPVHPPE YQKIATTTVE NAASWIDDAL RQALVYQKTI TETVDSTIDA SKARLSQIRD TSVAHTSQTI DSLRDIASEY 101: NVYEQMVFGK IKDGVNVAAS HPLISGTLAF GVGIFALKKT RRFVYYNTVR MFVSEEALLS RADLKVKELR QSMDRLKAES EKLERVATVA EEEFIRGRMK 201: LRQAGKQIRG AISSAYKIEK QAAGLKDVLK ELPTREASRF RTQISKRASE VKQERNALTK EVNKISNYGI SV |
||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)