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AT2G44760.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Domain of unknown function (DUF3598)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF3598 (InterPro:IPR022017); Has 41 Blast hits to 35 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IG8DeggNOG:ENOG410Y80MEMBL:CP002685EnsemblPlants:AT2G44760EnsemblPlants:AT2G44760.1entrez:819085GeneID:819085
Gramene:AT2G44760.1hmmpanther:PTHR36025hmmpanther:PTHR36025:SF1InParanoid:F4IV18InterPro:IPR011038KEGG:ath:AT2G44760OMA:KINWVTL
PaxDb:F4IV18PRIDE:F4IV18ProteinModelPortal:F4IV18Proteomes:UP000006548RefSeq:NP_182004.2SUPFAM:SSF50814TAIR:AT2G44760
UniGene:At.48590UniGene:At.70253UniProt:F4IV18
Coordinates (TAIR10) chr2:-:18452937..18454785
Molecular Weight (calculated) 55879.40 Da
IEP (calculated) 6.22
GRAVY (calculated) -0.52
Length 500 amino acids
Sequence (TAIR10)
(BLAST)
001: MILQKTMQSP FLHLCKSFTS SSPLSCHNHN ICFGFHNALL SPSICNFQRR NNVNGRKIVA QGSRLNDGNS RPAGNKGKVS LKGNKENIWS VDNEMAEKDK
101: RKVKPKGRKS GKRLGGGRKG KFGRVLVSGT MLIESETVLQ TQEPVIKPVW RTFASSVSGI WKGVGAVFSP ITGEMEPIEI GKKNESLYDC YTLSKIEALP
201: SPSSGANTES EIQRKINWVT LNPHGECSES KDEVFVDQSG VDSRLPKFES FNLKASDVME EDSMVDAPGL VYFEDGSYSR GPVTIPVGEM SESNYYLTPT
301: FKFEQCLVKG CHKRLRVVHT IEFANGGADI QIMRVGVYEE LWVSPSNYEE QSDNDAPLEL KPFSQRKRTQ PSELTGSWKV FEVNATPLYG EEAEFEQPGE
401: STPVVYLCTE ALKRRNLPET LVSFGEEEMI DMQDVSVMWL PGGVSAYVDV KKDGVLCIGV GWYSDEGINL VMERDYGLDG NLKEVRSKSE MKRRWTEEPK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)