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AT2G44745.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : WRKY family transcription factor
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
WRKY family transcription factor; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 13 (TAIR:AT4G39410.1); Has 3506 Blast hits to 3049 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3483; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).
Protein Annotations
BioGrid:4419eggNOG:ENOG410IY87eggNOG:ENOG410YIWNEMBL:AC003672EMBL:AF404857EMBL:AY088161EMBL:CP002685
EnsemblPlants:AT2G44745EnsemblPlants:AT2G44745.1entrez:819083ExpressionAtlas:Q1PEU5ExpressionAtlas:Q93WY4Gene3D:2.20.25.80GeneID:819083
Genevisible:Q93WY4GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0043565Gramene:AT2G44745.1hmmpanther:PTHR31221
InParanoid:Q93WY4InterPro:IPR003657KEGG:ath:AT2G44745OMA:FPIHNSSPaxDb:Q93WY4Pfam:PF03106Pfam:Q93WY4
Pfscan:PS50811PhylomeDB:Q93WY4PRIDE:Q93WY4PRO:PR:Q93WY4PROSITE:PS50811ProteinModelPortal:Q93WY4Proteomes:UP000006548
RefSeq:NP_566025.2SMART:SM00774SMR:Q93WY4STRING:3702.AT2G44745.1SUPFAM:0050605SUPFAM:SSF118290TAIR:AT2G44745
UniGene:At.26516UniProt:Q1PEU5UniProt:Q93WY4
Coordinates (TAIR10) chr2:-:18447482..18449004
Molecular Weight (calculated) 24549.20 Da
IEP (calculated) 8.73
GRAVY (calculated) -0.89
Length 218 amino acids
Sequence (TAIR10)
(BLAST)
001: MEGGGRRVFS NYDLQQVTSS STTIQENMNF LVPFEETNVL TFFSSSSSSS LSSPSFPIHN SSSTTTTHAP LGFSNNLQGG GPLGSKVVND DQENFGGGTN
101: NDAHSNSWWR SNSGSGDMKN KVKIRRKLRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN
201: HIPSDDSTSP DHDCLSSF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)