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AT2G44690.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Arabidopsis RAC-like 9
Curator
Summary (TAIR10)
A member of ROP GTPase gene family.
Computational
Description (TAIR10)
Arabidopsis RAC-like 9 (ARAC9); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Ras GTPase (InterPro:IPR001806), Ras small GTPase, Rab type (InterPro:IPR003579), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RAC-like 3 (TAIR:AT4G35020.3); Has 24763 Blast hits to 24736 proteins in 683 species: Archae - 8; Bacteria - 73; Metazoa - 12794; Fungi - 3855; Plants - 2697; Viruses - 20; Other Eukaryotes - 5316 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1100eggNOG:KOG0393EMBL:AC003672EMBL:BT025645EnsemblPlants:AT2G44690EnsemblPlants:AT2G44690.1entrez:819077
ExpressionAtlas:Q1ECR0Gene3D:3.40.50.300GeneID:819077GO:GO:0005525GO:GO:0005622GO:GO:0007264GO:GO:0016020
Gramene:AT2G44690.1hmmpanther:PTHR24072hmmpanther:PTHR24072:SF160InterPro:IPR001806InterPro:IPR005225InterPro:IPR027417KEGG:ath:AT2G44690
KO:K04392OMA:ITHHAAGPaxDb:Q1ECR0Pfam:PF00071Pfam:Q9XGU0Pfscan:PS51420PhylomeDB:Q1ECR0
PRIDE:Q1ECR0ProteinModelPortal:Q1ECR0RefSeq:NP_566024.1SMR:Q1ECR0SMR:Q9XGU0STRING:3702.AT2G44690.1SUPFAM:SSF52540
TAIR:AT2G44690tair10-symbols:ARAC9tair10-symbols:ATROP8tair10-symbols:ROP8TIGRfam:TIGR00231TIGRFAMs:TIGR00231UniGene:At.19430
UniGene:At.66370UniGene:At.68746UniProt:Q1ECR0UniProt:Q9XGU0
Coordinates (TAIR10) chr2:+:18429276..18430636
Molecular Weight (calculated) 22972.70 Da
IEP (calculated) 9.38
GRAVY (calculated) -0.08
Length 209 amino acids
Sequence (TAIR10)
(BLAST)
001: MSASMAATST SSATATTFIK CVTVGDGAVG KTCLLISYTS NTFPTDYVPT VFDNFNANVL VDGKTVNLGL WDTAGQEDYN RVRPLSYRGA DVFILAFSLI
101: SRPSFENIAK KWVPELRHYA PTVPIVLVGT KSDLRDNMQF PKNYPGACTI FPEQGQELRK EIGALAYIEC SSKAQMNVKA VFDEAIKVVL HPPSKTKKRK
201: RKIGLCHVL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)