AT2G44510.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : CDK inhibitor P21 binding protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
CDK inhibitor P21 binding protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: CDK inhibitor P21 binding protein (TAIR:AT5G03830.1); Has 392 Blast hits to 392 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 138; Plants - 52; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:18377411..18379030 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 37948.30 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.75 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.59 | ||||||||||||||||||||||||||||||||||||
| Length | 326 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPRRPSSGRR VLKHQPLTFS PFMRLLSFAS MARRDLSHPE DCQCSDEDIS FDEKQKIPNL PRKGKEEQVS DSSDEEDSQE DVQADFEFFD PKPTDFHGVK 101: ILLQNYLDDK EWDLSSFVDC ILEQTTVGTV VKVADDEDES VFALVTALNM ARDKDNKCFR ELKEFLRKVC SEKNIANNLE MLLEKKAQDV GLLVSQRVMN 201: LPPQLLPPLY DGLFDEVSWA IEDEPTEKLR RSFRFKSYLL VTKIYKLKNP KQRKPRHGEE DIEDTVFLKP EDELFLELSS WSFTFPMRSQ LVTSQEMKNY 301: QLMGLVMAVE ANKIPKFRQM LNSLID |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)