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AT2G44300.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZCNeggNOG:ENOG410YR9FEMBL:AB246329EMBL:AC004521EMBL:BT006196EMBL:CP002685EnsemblPlants:AT2G44300
EnsemblPlants:AT2G44300.1entrez:819038GeneID:819038GO:GO:0005886GO:GO:0006869GO:GO:0008289GO:GO:0016021
GO:GO:0031225Gramene:AT2G44300.1hmmpanther:PTHR33044hmmpanther:PTHR33044:SF21HOGENOM:HOG000005747InterPro:IPR000528InterPro:IPR016140
KEGG:ath:AT2G44300OMA:REECANQPfam:PF14368PhylomeDB:O64865PIR:T02386PRINTS:PR00382Proteomes:UP000006548
RefSeq:NP_181959.1SMART:SM00499SMR:O64865STRING:3702.AT2G44300.1SUPFAM:SSF47699TAIR:AT2G44300TMHMM:TMhelix
UniGene:At.43124UniProt:O64865
Coordinates (TAIR10) chr2:-:18307468..18308286
Molecular Weight (calculated) 21707.20 Da
IEP (calculated) 6.88
GRAVY (calculated) 0.09
Length 204 amino acids
Sequence (TAIR10)
(BLAST)
001: MESRKINLMA TAIALIVVAM VVAAADDKTK DKEECTEQLV GMATCLPYVQ GQAKSPTPDC CSGLKQVLNS NKKCLCVIIQ DRNDPDLGLQ INVSLALALP
101: SVCHAAADVT KCPALLHLDP NSPDAQVFYQ LAKGLNKTGP ASAPTGSSPG PISISPTSGS DDGNNSGRTT SVPGRNHAQS FYKQWLGLEV VFHFFVIFYI
201: FILV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)