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AT2G44080.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
FP Images

Arabidopsis cell culture (mitochondrial marker)

At2g44080-GFP
(full-length)
mitochondrial marker-RFPoverlay

Images by Sandra Tanz

Arabidopsis cell culture (endoplasmic reticulum marker)

At2g44080-GFP
(full-length)
endoplasmic reticulum marker-RFPoverlay

Images by Sandra Tanz
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ARGOS-like
Curator
Summary (TAIR10)
Encodes ARL, a gene similar to ARGOS involved in cell expansion-dependent organ growth. Upregulated by brassinosteroid. Acts downstream of BRI1.
Computational
Description (TAIR10)
ARGOS-like (ARL); BEST Arabidopsis thaliana protein match is: auxin-regulated gene involved in organ size (TAIR:AT3G59900.1); Has 88 Blast hits to 88 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:4350eggNOG:ENOG410J7TTeggNOG:ENOG4111AW2EMBL:AC004005EMBL:AY080817EMBL:BT000930EMBL:CP002685
EMBL:DQ369723EnsemblPlants:AT2G44080EnsemblPlants:AT2G44080.1entrez:819014GeneID:819014Genevisible:Q8RXL7GO:GO:0005622
GO:GO:0005634GO:GO:0005783GO:GO:0007275GO:GO:0009741GO:GO:0016021GO:GO:0016049GO:GO:0035265
Gramene:AT2G44080.1hmmpanther:PTHR36023hmmpanther:PTHR36023:SF3HOGENOM:HOG000029177InParanoid:Q8RXL7IntAct:Q8RXL7KEGG:ath:AT2G44080
OMA:YIRTASQPaxDb:Q8RXL7Pfam:Q8RXL7PhylomeDB:Q8RXL7PIR:T00688PRIDE:Q8RXL7PRO:PR:Q8RXL7
Proteomes:UP000006548RefSeq:NP_850409.1STRING:3702.AT2G44080.1TAIR:AT2G44080tair10-symbols:ARLTMHMM:TMhelixUniGene:At.36798
UniProt:Q8RXL7
Coordinates (TAIR10) chr2:+:18237726..18238133
Molecular Weight (calculated) 15000.60 Da
IEP (calculated) 10.31
GRAVY (calculated) 0.26
Length 135 amino acids
Sequence (TAIR10)
(BLAST)
001: MIREFSSLQN DIINIQEHYS LNNNMDVRGD HNRKNTSFRG SAPAPIMGKQ ELFRTLSSQN SPRRLISASY FSLESMVVLV GLTASLLILP LILPPLPPPP
101: FMLLLIPIGI MVLLMVLAFM PSSNSKHVSS SSTFM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)