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AT2G44010.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.497
nucleus 0.440
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G59880.1); Has 18 Blast hits to 18 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JJC5eggNOG:ENOG4111E1JEMBL:AC004005EMBL:BT011708EMBL:CP002685EnsemblPlants:AT2G44010EnsemblPlants:AT2G44010.1
entrez:819006GeneID:819006GO:GO:0010227Gramene:AT2G44010.1hmmpanther:PTHR35485hmmpanther:PTHR35485:SF1HOGENOM:HOG000115133
KEGG:ath:AT2G44010OMA:HRLFSCIPhylomeDB:O80571PIR:T00681Proteomes:UP000006548RefSeq:NP_181929.1STRING:3702.AT2G44010.1
TAIR:AT2G44010UniGene:At.19498UniProt:O80571
Coordinates (TAIR10) chr2:+:18216879..18217184
Molecular Weight (calculated) 11517.70 Da
IEP (calculated) 10.85
GRAVY (calculated) -0.82
Length 101 amino acids
Sequence (TAIR10)
(BLAST)
001: MDGLIPMALK AVKKNLTRRR YERLSYSATT RESYDFASDI EMNVDGRHHR RGWSVGDFSS LSSRETKRNG GVAPEKSLTP PREGQLVRFK SHRLFSCISG
101: Q
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)