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AT2G43850.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 0.720
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Integrin-linked protein kinase family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G59830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG0192EMBL:CP002685EnsemblPlants:AT2G43850EnsemblPlants:AT2G43850.1entrez:818989ExpressionAtlas:F4IS56
Gene3D:1.25.40.20GeneID:818989GO:GO:0004674GO:GO:0004712GO:GO:0005524GO:GO:0007229GO:GO:0046777
Gramene:AT2G43850.1hmmpanther:PTHR23257hmmpanther:PTHR23257:SF378InParanoid:F4IS56InterPro:IPR000719InterPro:IPR001245InterPro:IPR002110
InterPro:IPR008271InterPro:IPR011009InterPro:IPR020683KEGG:ath:AT2G43850PaxDb:F4IS56Pfam:PF07714Pfam:PF12796
Pfam:PF13857Pfscan:PS50011Pfscan:PS50088Pfscan:PS50297PRIDE:F4IS56PROSITE:PS00108PROSITE:PS50011
PROSITE:PS50088PROSITE:PS50297ProteinModelPortal:F4IS56Proteomes:UP000006548Reactome:R-ATH-450302Reactome:R-ATH-450321RefSeq:NP_181913.3
scanprosite:PS00108SMART:SM00220SMART:SM00248SMR:F4IS56STRING:3702.AT2G43850.1SUPFAM:SSF48403SUPFAM:SSF56112
TAIR:AT2G43850UniGene:At.36834UniGene:At.50136UniProt:F4IS56
Coordinates (TAIR10) chr2:-:18159517..18161984
Molecular Weight (calculated) 54417.60 Da
IEP (calculated) 9.93
GRAVY (calculated) -0.50
Length 479 amino acids
Sequence (TAIR10)
(BLAST)
001: MENITAQLKR GISRQFSTGS IRRTLSRQFT RQSSLDPRRT NMRFSFGRQS SLDPIRRSPD SSKSDDEPHM SVPENLDSTM QLLFMASKGD VRGIEELLDE
101: GIDVNSIDLD GRTALHIAAC EGHLGVVKAL LSRRANIDAR DRWGSTAAAD AKYYGNLDVY NLLKARGAKV PKTRKTPMTV SNPREVPEYE LNPLEVQVRK
201: SDGISKGAYQ VAKWNGTRVS VKILDKDSYS DPERINAFRH ELTLLEKVRH PNVIQFVGAV TQNIPMMIVV EYNPKGDLSV YLQKKGRLSP SKALRFALDI
301: ARGMNYLHEC KPDPIIHCDL KPKNILLDRG GQLKISGFGM IRLSKISQDK AKVANHKAHI DLSNYYIAPE VYKDEIFDLR VDAHSFGVIL YEITEGVPVF
401: HPRPPEEVAR MMCLEGKRPV FKTKSRSYPP DIKELIEKCW HPEAGIRPTF SEIIIRLDKI VANCSKQGWW KDTFKFPWK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)