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AT2G43680.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.712
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : IQ-domain 14
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
IQ-domain 14 (IQD14); FUNCTIONS IN: calmodulin binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 13 (TAIR:AT3G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J7TKeggNOG:ENOG4111DSAEMBL:CP002685EnsemblPlants:AT2G43680EnsemblPlants:AT2G43680.1entrez:818970ExpressionAtlas:B3H4F6
GeneID:818970GO:GO:0005886Gramene:AT2G43680.1hmmpanther:PTHR32295hmmpanther:PTHR32295:SF18HOGENOM:HOG000238563InterPro:IPR000048
InterPro:IPR025064iPTMnet:B3H4F6OMA:AYRGYMAPaxDb:B3H4F6Pfam:PF00612Pfam:PF13178Pfscan:PS50096
PRIDE:B3H4F6PROSITE:PS50096ProteinModelPortal:B3H4F6Proteomes:UP000006548RefSeq:NP_850399.2SMART:SM00015SMR:B3H4F6
STRING:3702.AT2G43680.1TAIR:AT2G43680tair10-symbols:IQD14UniGene:At.24712UniGene:At.74238UniProt:B3H4F6
Coordinates (TAIR10) chr2:+:18109302..18111587
Molecular Weight (calculated) 74414.30 Da
IEP (calculated) 11.87
GRAVY (calculated) -1.03
Length 669 amino acids
Sequence (TAIR10)
(BLAST)
001: MVKKGSWFSA IKRVFTPHSK EKLANQEPER KSGKEKKKKG FGKLRHGETN SFLPIFREPS SIEKILGEAE RDHNLVFRPP TPDRPNPYSA SPPPRPASPR
101: VASPRPTSPR VASPRVPSPR AEVPRTLSPK PPSPRAEVPR SLSPKPPSPR ADLPRSLSPK PFDRSKPSSA SANAPPTLRP ASTRVPSQRI TPHSVPSPRP
201: SSPRGASPQA ISSKPPSPRA EPPTLDTPRP PSPRAASLRA DPPRLDAARP TTPRPPSPLA DAPRLDAPRP TTPKPPSPRS DPPRLDAPRP TTPKPPSPRS
301: VSPRAVQRRE IVYRPEPTLP VQHASATKIQ GAFRGYMARK SFRALKGLVR LQGVVRGYSV KRQTINAMKY MQQVVRVQSQ IQSRRIKMLE NQAQVEKDEA
401: KWAASEAGND NWDDSVLTKE ERDSRSQRKT DAIIKRERSM AYAYSRKLWK NSPKSTQDNR SFPQWWNWVD RQNPLASPAP SYSQPQRDFR LTPSRLCPSP
501: LSQSSKQHHI RLDNHFDTST PRSSRSTFHT PSRPIHTGTS RYSRGRLRGQ DSPFKDDDSL TSCPPFPSYM APTVSAKAKV RPNSNPKERV MGTPVSEKRR
601: MSYPPTQDTF RWNKGSLVMS NSSSHRGPGS PGGVVLEKHK TLKSVGNLSI GSTASMATTV GRKEFNRFV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)