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AT2G43540.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.648
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 27 Blast hits to 27 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZ4YeggNOG:ENOG4112AVDEMBL:AC002335EMBL:AY086751EMBL:BT043483EMBL:CP002685EnsemblPlants:AT2G43540
EnsemblPlants:AT2G43540.1entrez:818956GeneID:818956GO:GO:0016021Gramene:AT2G43540.1hmmpanther:PTHR36743hmmpanther:PTHR36743:SF1
HOGENOM:HOG000240889KEGG:ath:AT2G43540OMA:SEFNSACPhylomeDB:O22868PIR:D84867Proteomes:UP000006548RefSeq:NP_566001.1
TAIR:AT2G43540TMHMM:TMhelixUniGene:At.12199UniGene:At.73177UniProt:O22868
Coordinates (TAIR10) chr2:+:18072385..18072894
Molecular Weight (calculated) 17800.20 Da
IEP (calculated) 6.79
GRAVY (calculated) 0.23
Length 169 amino acids
Sequence (TAIR10)
(BLAST)
001: MGISGSKRVT TILSNSPEFD SACDSAYDES LSLAQHAFAG VRPYQLVSAA AHIHRNLSAL RFPLITRWLS SPPSQSQVDS ALRVTVSRVT AADEEEILGQ
101: EEFKKWAVEV FAEAVVGNAR KTIASRIPLG IVGIGGIGAV TRSGQNLIGA AIGVYAIGVA TSVFLSLTD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)