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AT2G43510.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : trypsin inhibitor protein 1
Curator
Summary (TAIR10)
Member of the defensin-like (DEFL) family. Encodes putative trypsin inhibitor protein which may function in defense against herbivory.
Computational
Description (TAIR10)
trypsin inhibitor protein 1 (TI1); FUNCTIONS IN: serine-type endopeptidase inhibitor activity; INVOLVED IN: defense response to fungus, defense response; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Scorpion long chain toxin (InterPro:IPR002061), Knottin (InterPro:IPR003614); BEST Arabidopsis thaliana protein match is: Scorpion toxin-like knottin superfamily protein (TAIR:AT2G43535.1); Has 146 Blast hits to 146 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
BioGrid:4288eggNOG:ENOG410JS1TeggNOG:ENOG4111CSIEMBL:AC002335EMBL:AJ249958EMBL:AJ632250EMBL:AJ632251
EMBL:AJ632252EMBL:AJ632253EMBL:AJ632254EMBL:AJ632255EMBL:AJ632256EMBL:AJ632257EMBL:AJ632258
EMBL:AJ632259EMBL:AJ632260EMBL:AJ632261EMBL:AJ632262EMBL:AJ632263EMBL:AJ632264EMBL:AJ632265
EMBL:AJ632266EMBL:AY050789EMBL:AY096456EMBL:CP002685EMBL:Z46816EnsemblPlants:AT2G43510EnsemblPlants:AT2G43510.1
entrez:818952EvolutionaryTrace:Q42328Gene3D:3.30.30.10GeneID:818952Genevisible:Q42328GO:GO:0004867GO:GO:0005576
GO:GO:0006952GO:GO:0008200GO:GO:0010951GO:GO:0031640GO:GO:0050832Gramene:AT2G43510.1HOGENOM:HOG000090027
InParanoid:Q42328IntAct:Q42328InterPro:IPR002061InterPro:IPR003614KEGG:ath:AT2G43510MEROPS:I18.001OMA:EAQGNEC
PaxDb:Q42328PDB:1JXCPDBsum:1JXCPfam:PF00537Pfam:Q42328PhylomeDB:Q42328PIR:A84867
PRIDE:Q42328PRO:PR:Q42328ProteinModelPortal:Q42328Proteomes:UP000006548RefSeq:NP_181879.1SMART:SM00505SMR:Q42328
STRING:3702.AT2G43510.1SUPFAM:SSF57095TAIR:AT2G43510tair10-symbols:ATTI1tair10-symbols:TI1TMHMM:TMhelixUniGene:At.10318
UniProt:Q42328
Coordinates (TAIR10) chr2:+:18067211..18067620
Molecular Weight (calculated) 9885.96 Da
IEP (calculated) 6.29
GRAVY (calculated) 0.13
Length 89 amino acids
Sequence (TAIR10)
(BLAST)
1: MAKAIVSIFV VFFIFFLVIS DVPEIEAQGN ECLKEYGGDV GFGFCAPRIF PTICYTRCRE NKGAKGGRCR WGQGSNVKCL CDFCDDTPQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)