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AT2G43360.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Radical SAM superfamily protein
Curator
Summary (TAIR10)
Catalyzes the conversion of dethiobiotin to biotin.
Computational
Description (TAIR10)
BIOTIN AUXOTROPH 2 (BIO2); CONTAINS InterPro DOMAIN/s: Biotin/thiamin synthesis-associated protein (InterPro:IPR010722), Aldolase-type TIM barrel (InterPro:IPR013785), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197), Biotin synthase (InterPro:IPR002684); Has 5366 Blast hits to 5366 proteins in 2012 species: Archae - 191; Bacteria - 4453; Metazoa - 6; Fungi - 120; Plants - 75; Viruses - 0; Other Eukaryotes - 521 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0502eggNOG:KOG2900EMBL:BT024899EnsemblPlants:AT2G43360EnsemblPlants:AT2G43360.1entrez:818937ExpressionAtlas:Q24JJ0
Gene3D:3.20.20.70GeneID:818937GO:GO:0004076GO:GO:0009102GO:GO:0046872GO:GO:0051537GO:GO:0051539
Gramene:AT2G43360.1gramene_plant_reactome:1119610gramene_plant_reactome:6874499gramene_plant_reactome:6876211HAMAP:MF_01694hmmpanther:PTHR22976hmmpanther:PTHR22976:SF19
InterPro:IPR002684InterPro:IPR006638InterPro:IPR007197InterPro:IPR010722InterPro:IPR013785InterPro:IPR024177KEGG:00780+2.8.1.6
KEGG:ath:AT2G43360KO:K01012OMA:PFDFIRMPaxDb:Q24JJ0Pfam:P54967Pfam:PF04055Pfam:PF06968
PhylomeDB:Q24JJ0PIRSF:PIRSF001619PRIDE:Q24JJ0ProteinModelPortal:Q24JJ0RefSeq:NP_181864.1SMART:SM00729SMART:SM00876
SMR:Q24JJ0STRING:3702.AT2G43360.1SUPFAM:SSF102114TAIR:AT2G43360tair10-symbols:BIO2tair10-symbols:BIOBTIGRfam:TIGR00433
TIGRFAMs:TIGR00433UniGene:At.10203unipathway:UPA00078UniProt:P54967UniProt:Q24JJ0
Coordinates (TAIR10) chr2:-:18010918..18013129
Molecular Weight (calculated) 41683.90 Da
IEP (calculated) 6.97
GRAVY (calculated) -0.28
Length 378 amino acids
Sequence (TAIR10)
(BLAST)
001: MMLVRSVFRS QLRPSVSGGL QSASCYSSLS AASAEAERTI REGPRNDWSR DEIKSVYDSP LLDLLFHGAQ VHRHVHNFRE VQQCTLLSIK TGGCSEDCSY
101: CPQSSRYSTG VKAQRLMSKD AVIDAAKKAK EAGSTRFCMG AAWRDTIGRK TNFSQILEYI KEIRGMGMEV CCTLGMIEKQ QALELKKAGL TAYNHNLDTS
201: REYYPNVITT RSYDDRLETL SHVRDAGINV CSGGIIGLGE AEEDRIGLLH TLATLPSHPE SVPINALLAV KGTPLEDQKP VEIWEMIRMI GTARIVMPKA
301: MVRLSAGRVR FSMSEQALCF LAGANSIFTG EKLLTTPNND FDADQLMFKT LGLIPKPPSF SEDDSESENC EKVASASH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)