AT2G43320.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.468 golgi 0.226 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: Putative methyltransferase family protein (TAIR:AT4G14000.1); Has 304 Blast hits to 295 proteins in 127 species: Archae - 0; Bacteria - 2; Metazoa - 118; Fungi - 41; Plants - 98; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:17996874..17999158 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38629.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.42 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.25 | ||||||||||||||||||||||||||||||||||||
| Length | 351 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRAPSLLAQC LPGLLPQDRG GVSALSEKDL QLPTPAVEII PSKTVAHHRY SGENLDALGL QVFKGKVSVA DIIGLSGSET APLKNEGSLK SWESSVVLVN 101: VLKNEIRDGQ LSFRGKRVLE LGCNFGVPGI FACLKGASSV HFQDLSAETI RCTTIPNVLA NLEQARDRQS RQPESPLTPS RQAISASVRF YAGEWEELST 201: VLSIIRTDVL EPSIPAMNLS FSEEDFMDGC SSQDGSITGQ PDFSSRRSRK LSGSRAWERA NETGQEGEYG YDVILMTEIP YSITSLKKLY SLIKKCLRPP 301: YGVMYLAAKK QYVGFNSGAK HLRNLVDEET ILGAHLVKET TDRDIWKFFL K |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)