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AT2G42950.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.643
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Magnesium transporter CorA-like family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Magnesium transporter CorA-like family protein; FUNCTIONS IN: metal ion transmembrane transporter activity; INVOLVED IN: metal ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: Magnesium transporter CorA-like family protein (TAIR:AT1G29820.2); Has 661 Blast hits to 660 proteins in 306 species: Archae - 0; Bacteria - 590; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JW8IeggNOG:ENOG411055XEMBL:AK117816EMBL:BT009689EMBL:CP002685EnsemblPlants:AT2G42950EnsemblPlants:AT2G42950.1
entrez:818896GeneID:818896GO:GO:0016021GO:GO:0046873Gramene:AT2G42950.1hmmpanther:PTHR21535hmmpanther:PTHR21535:SF50
HOGENOM:HOG000029764InterPro:IPR002523KEGG:ath:AT2G42950ncoils:CoilOMA:ACRLARWPfam:PF01544PhylomeDB:Q8GY73
Proteomes:UP000006548RefSeq:NP_181823.2SUPFAM:0053126TAIR:AT2G42950TMHMM:TMhelixUniGene:At.36953UniProt:Q8GY73
Coordinates (TAIR10) chr2:+:17864059..17866407
Molecular Weight (calculated) 56982.50 Da
IEP (calculated) 6.27
GRAVY (calculated) -0.19
Length 501 amino acids
Sequence (TAIR10)
(BLAST)
001: MNANHKNGNP GYHNLWTNGL ICAFEFCQGR RKNNTSVHGD SSLRIKKQEC ETDQFGTGED EEHSRSYWRG IGWDRISELV QTVQVDNNWD LRKIDLDEDE
101: ATVAELAAPY WERPLAGPTW WCHLDATHHG IASWLRNAHW LHPAVSLALR DESKLISERM KHIFYEVPVR VAGGLLFELL GQSAGDPFIQ EDDIPIVLRS
201: WQAQNFLVTA LHVKGFALNI SVLGITEVQE MLIAGGACIP RTVHELIAHL ACRLARWDDR LFRKYIFGAA DEVELMFMNK RLYEDPNLFT TILNQEIRRL
301: STQVIRVKWS LHAREEIVFE LLQQLKGNRT KDLLEGIKKS TRDMINEQEA VRGRLFTIQD VMQNTVRAWL QDQSLTVTHN LGIFGGVGLL ITIVTGLFGI
401: NVDGIPGAKD FPQAFALFSV VLFVSGLVLV VAGLIYLGLK EPVAEENVET RKLELDEMVK KFQQEAESHA QVCKKVPQNI ERTTSRSRMI VHDPNGYVLL
501: E
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)