suba logo
AT2G42880.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
cytosol 0.820
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : MAP kinase 20
Curator
Summary (TAIR10)
member of MAP Kinase
Computational
Description (TAIR10)
MAP kinase 20 (MPK20); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 19 (TAIR:AT3G14720.1); Has 119531 Blast hits to 118315 proteins in 3667 species: Archae - 102; Bacteria - 13281; Metazoa - 43923; Fungi - 12334; Plants - 29390; Viruses - 579; Other Eukaryotes - 19922 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G42880-MONOMERBioGrid:4225EC:2.7.11.24eggNOG:ENOG410XNY0eggNOG:KOG0660EMBL:AC006931EMBL:AF412082
EMBL:BT001021EMBL:CP002685EnsemblPlants:AT2G42880EnsemblPlants:AT2G42880.1entrez:818888GeneID:818888Genevisible:Q9SJG9
GO:GO:0000165GO:GO:0004707GO:GO:0005524GO:GO:0005622Gramene:AT2G42880.1hmmpanther:PTHR24055hmmpanther:PTHR24055:SF158
HOGENOM:HOG000233024InParanoid:Q9SJG9IntAct:Q9SJG9InterPro:IPR000719InterPro:IPR003527InterPro:IPR011009InterPro:IPR017441
iPTMnet:Q9SJG9KEGG:ath:AT2G42880OMA:PFIMARTPaxDb:Q9SJG9Pfam:PF00069Pfam:Q9SJG9Pfscan:PS50011
PhylomeDB:Q9SJG9PIR:D84859PRIDE:Q9SJG9PRO:PR:Q9SJG9PROSITE:PS00107PROSITE:PS01351PROSITE:PS50011
ProteinModelPortal:Q9SJG9Proteomes:UP000006548RefSeq:NP_565989.1scanprosite:PS00107scanprosite:PS01351SMART:SM00220SMR:Q9SJG9
STRING:3702.AT2G42880.1SUPFAM:SSF56112TAIR:AT2G42880tair10-symbols:ATMPK20tair10-symbols:MPK20UniGene:At.14161UniProt:Q9SJG9
Coordinates (TAIR10) chr2:-:17840572..17843947
Molecular Weight (calculated) 68778.80 Da
IEP (calculated) 9.79
GRAVY (calculated) -0.44
Length 606 amino acids
Sequence (TAIR10)
(BLAST)
001: MQQDNRKKNN LEMEFFSDYG DANRFKVQEV IGKGSYGVVC SAIDTLTGEK VAIKKIHDIF EHISDAARIL REIKLLRLLR HPDIVEIKHI MLPPSRREFK
101: DIYVVFELME SDLHQVIKAN DDLTREHYQF FLYQLLRALK YIHTANVYHR DLKPKNILAN ANCKLKICDF GLARVAFNDT PTTIFWTDYV ATRWYRAPEL
201: CGSFYSKYTP AIDIWSIGCI FAEVLMGKPL FPGKNVVHQL DLMTDLLGTP SLDTISRVRN EKARRYLTSM RKKPPIPFAQ KFPNADPLSL KLLERLLAFD
301: PKDRPTAEEA LADPYFKGLA KVEREPSCQP ITKMEFEFER RKVTKEDIRE LISREILEYH PQLLKDHMNG ADKASFLYPS AVDQFRRQFA HLEENSGKTG
401: PVAPLERKHA SLPRSTVIHS TAVARGGQPK LMNNTNTLNP ETTQNIPFNH ATIQAQQRNL SAAKPSTFMG PVAPFDNGRI SRDAYDPRSF IRSTNLPFSQ
501: QSAATVAMGK QQERRTTMEP EKQARQISQY NRYAPDVAIN IDNNPFIMAR TGMNKAENIS DRIIIDTNLL QATAGIGVAA AAAAAAPGGS AHRKVGAVRY
601: GMSKMY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)