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AT2G42750.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DNAJ heat shock N-terminal domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G23240.1); Has 17700 Blast hits to 17698 proteins in 3061 species: Archae - 180; Bacteria - 8514; Metazoa - 2668; Fungi - 1485; Plants - 1554; Viruses - 15; Other Eukaryotes - 3284 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1141eggNOG:ENOG410IMMXEMBL:AC006931EMBL:AY069893EMBL:AY085558EMBL:AY097391EMBL:CP002685
EnsemblPlants:AT2G42750EnsemblPlants:AT2G42750.1entrez:818875Gene3D:1.10.287.110GeneID:818875GO:GO:0005506GO:GO:0009055
GO:GO:0009507Gramene:AT2G42750.1hmmpanther:PTHR24078hmmpanther:PTHR24078:SF255HOGENOM:HOG000005994InterPro:IPR001080InterPro:IPR001623
InterPro:IPR017896KEGG:ath:AT2G42750OMA:CMFINDIPfam:PF00226Pfam:PF13370Pfscan:PS50076Pfscan:PS51379
PhylomeDB:Q9SJI1PIR:G84857PRINTS:PR00352PRINTS:PR00625PROSITE:PS50076PROSITE:PS51379Proteomes:UP000006548
RefSeq:NP_565982.1SMART:SM00271SMR:Q9SJI1STRING:3702.AT2G42750.1SUPFAM:SSF46565SUPFAM:SSF54862TAIR:AT2G42750
UniGene:At.23733UniProt:Q9SJI1
Coordinates (TAIR10) chr2:+:17793404..17795419
Molecular Weight (calculated) 38824.50 Da
IEP (calculated) 6.51
GRAVY (calculated) -0.63
Length 344 amino acids
Sequence (TAIR10)
(BLAST)
001: MAQILSPVCT DLLKFQNSAL SSRSGASPRF SAKTTGASSS WYLPRYAGKR RTDSIGRLRV ATEDASSLST GDVADDYYAV LGLLPDATQE EIKKAYYNCM
101: KSCHPDLSGN DPETTNFCMF INDIYEILSD PVQRMVYDEI HGYTVTAINP FLDDSTPRDH VFVDEFACIG CKNCANVAPD IFQIEEDFGR ARACNQRGNP
201: DLVQQAVETC PVDCIHQTSA AQLSLLEDEM RRVERVNVAL MLSGMGSGAV DVFRMARSRW EKRQAKVLNQ ARSRMMKRKN TDETPSYWDN LWGKQNEYQK
301: SEEEVQERAQ RAAAAARRWR EYSRRGVDKR PTFKLPDSAS RGDN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)