suba logo
AT2G42640.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
cytosol 0.723
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:17151019 (2007): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mitogen activated protein kinase kinase kinase-related
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Mitogen activated protein kinase kinase kinase-related; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Mitogen activated protein kinase kinase kinase-related (TAIR:AT3G58640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG0192EMBL:CP002685EnsemblPlants:AT2G42640EnsemblPlants:AT2G42640.1entrez:818864GeneID:818864
GO:GO:0004672GO:GO:0005524Gramene:AT2G42640.1hmmpanther:PTHR23257hmmpanther:PTHR23257:SF435InParanoid:F4IP61InterPro:IPR000719
InterPro:IPR001245InterPro:IPR008266InterPro:IPR011009InterPro:IPR017441KEGG:ath:AT2G42640OMA:NSPMERSPaxDb:F4IP61
Pfam:PF07714Pfam:PF14381Pfscan:PS50011PRIDE:F4IP61PRINTS:PR00109PROSITE:PS00107PROSITE:PS00109
PROSITE:PS50011ProteinModelPortal:F4IP61Proteomes:UP000006548RefSeq:NP_181792.4scanprosite:PS00107scanprosite:PS00109SMR:F4IP61
STRING:3702.AT2G42640.1SUPFAM:SSF56112TAIR:AT2G42640UniGene:At.50131UniProt:F4IP61
Coordinates (TAIR10) chr2:-:17758532..17763708
Molecular Weight (calculated) 86074.40 Da
IEP (calculated) 6.22
GRAVY (calculated) -0.25
Length 781 amino acids
Sequence (TAIR10)
(BLAST)
001: MGAKCCRGHR GSVVESNGSV ILSLADLEVQ ATDLREMTVV EARDAAGPSE PRPPSPTLRP SEVEETSEPV CQGSLVETSN TDDAGPSEPN PPSPTLRPSE
101: VEKIYVPVCQ GSLAETSNLD QDGVSSYEAS NIFWSTGSLS DPIPSGFYTV IPVERLMHFK SIPTLEEINA LGEDRLKADA IFVDLKNDIQ LVLIKEFVIK
201: LVTGLDSDKV IKKIAGLVAN IYKRKTLQSP ARTLQYFDVQ GFTLLGQIKH GSCRARAILF KVLADAVGLD SKLVMGFPTD LRFSASIDSY NHISAVVELN
301: NVEMLVDLKR CPGQLKPFSP KAVYMAHISM AWQPDFVDNN PCASPLEPNS PMERSGPPSA LQSGLSRSLG EPNIATEVLR RKVIKEPPPA DFSGNSGAAE
401: SESKRTNGRC MNTPDLNNDI ARATMMQSDL LKERGVDDSS PYSPDEKNVS GFQLDSHDLV SGECSTVYPR KSISLPSSPR SYQIQLSERS EHSPQEISHI
501: WNEVLESPMF QNKPLLPFEE WNIDFSKLKV GASVGSGTSG VVCRGVWNKT EVAIKIFLGQ QLTAENMKVF CNEISILSRL QHPNVILLLG ACTKPPQLSL
601: VTEYMSTGSL YDVIRTRKKE LSWQRKLKIL AEICRGLMYI HKMGIVHRDL TSANCLLNKS IVKICDFGLS RRMTGTAVKD TEAAGTPEWM APELIRNEPV
701: TEKSDIFSFG VIMWELSTLS KPWKGVPKEK VIHIVANEGA RLKIPEGPLQ KLIADCWSEP EQRPSCKEIL HRLKTCEIPI C
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)