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AT2G42600.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phosphoenolpyruvate carboxylase 2
Curator
Summary (TAIR10)
Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.
Computational
Description (TAIR10)
phosphoenolpyruvate carboxylase 2 (PPC2); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity, catalytic activity; INVOLVED IN: tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6860 Blast hits to 6799 proteins in 1908 species: Archae - 27; Bacteria - 2656; Metazoa - 4; Fungi - 0; Plants - 1774; Viruses - 0; Other Eukaryotes - 2399 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2357-MONOMERBioGrid:4197BRENDA:4.1.1.31EC:4.1.1.31eggNOG:COG2352eggNOG:ENOG410IEAREMBL:AC007087
EMBL:AJ532902EMBL:AY210895EMBL:CP002685EnsemblPlants:AT2G42600EnsemblPlants:AT2G42600.1EnsemblPlants:AT2G42600.2entrez:818860
GeneID:818860Genevisible:Q5GM68GO:GO:0005829GO:GO:0005886GO:GO:0006099GO:GO:0008964GO:GO:0009506
GO:GO:0009507GO:GO:0015977GO:GO:0015979GO:GO:0048046GO:GO:0048366Gramene:AT2G42600.1Gramene:AT2G42600.2
gramene_pathway:4.1.1.31gramene_pathway:PWY-6549gramene_pathway:PWYQT-4429HAMAP:MF_00595hmmpanther:PTHR30523hmmpanther:PTHR30523:SF8HOGENOM:HOG000238648
InParanoid:Q5GM68InterPro:IPR015813InterPro:IPR018129InterPro:IPR021135InterPro:IPR022805InterPro:IPR033129iPTMnet:Q5GM68
KEGG:00620+4.1.1.31KEGG:00680+4.1.1.31KEGG:00710+4.1.1.31KEGG:00720+4.1.1.31KEGG:ath:AT2G42600KO:K01595OMA:MDEMAII
PaxDb:Q5GM68Pfam:PF00311Pfam:Q5GM68PhylomeDB:Q5GM68PIR:H84855PRIDE:Q5GM68PRINTS:PR00150
PRO:PR:Q5GM68PROSITE:PS00393PROSITE:PS00781ProteinModelPortal:Q5GM68Proteomes:UP000006548RefSeq:NP_850372.4RefSeq:NP_850373.4
scanprosite:PS00393scanprosite:PS00781SMR:Q5GM68STRING:3702.AT2G42600.1SUPFAM:SSF51621TAIR:AT2G42600tair10-symbols:ATPPC2
tair10-symbols:PPC2UniGene:At.14366UniProt:Q5GM68
Coordinates (TAIR10) chr2:-:17734541..17738679
Molecular Weight (calculated) 109760.00 Da
IEP (calculated) 5.51
GRAVY (calculated) -0.39
Length 963 amino acids
Sequence (TAIR10)
(BLAST)
001: MAARNLEKMA SIDAQLRLLA PGKVSEDDKL IEYDALLLDR FLDILQDLHG EDVREFVQEC YEVAADYDGN RNTEKLEELG NMLTSLDPGD SIVVTKSFSN
101: MLSLANLAEE VQIAYRRRIK KLKKGDFADE ASATTESDIE ETLKRLLQLN KTPEEVFDAL KNQTVDLVLT AHPTQSVRRS LLQKFGRIRD CLTQLYAKDI
201: TPDDKQELDE ALQREIQAAF RTDEIRRTPP TPQDEMRAGM SYFHETIWKG VPKFLRRVDT ALKNIGINER VPYNAPLIQF SSWMGGDRDG NPRVTPEVTR
301: DVCLLARMMA ANLYFSQIED LMFEMSMWRC NEELRVRAER QRCAKRDAKH YIEFWKQIPA NEPYRAILGD VRDKLYNTRE RARQLLSSGV SDVPEDAVFT
401: SVDQFLEPLE LCYRSLCDCG DRPIADGSLL DFLRQVSTFG LALVKLDIRQ ESERHSDVLD AITTHLGIGS YKEWSEDKRQ EWLLSELSGK RPLFGPDLPK
501: TEEVADVLDT FKVISELPSD SFGAYIISMA TAPSDVLAVE LLQRECGITD PLRVVPLFEK LADLESAPAA VARLFSIEWY RNRINGKQEV MIGYSDSGKD
601: AGRLSAAWQL YKTQEELVKV AKEYGVKLTM FHGRGGTVGR GGGPTHLAIL SQPPDTIHGQ LRVTVQGEVI EQSFGEEHLC FRTLQRFTAA TLEHGMHPPV
701: SPKPEWRVLM DEMAIIATEE YRSVVFKEPR FVEYFRLATP ELEYGRMNIG SRPSKRKPSG GIESLRAIPW IFAWTQTRFH LPVWLGFGGA FKRVIQKDSK
801: NLNMLKEMYN QWPFFRVTID LVEMVFAKGD PGIAALYDRL LVSEELQPFG EQLRVNYQET RRLLLQVAGH KDILEGDPYL RQRLQLRDPY ITTLNVCQAY
901: TLKQIRDPSF HVKVRPHLSK DYMESSPAAE LVKLNPKSEY APGLEDTVIL TMKGIAAGMQ NTG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)