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AT2G42210.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Curator
Summary (TAIR10)
Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family.
Computational
Description (TAIR10)
OEP16-3; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); Has 303 Blast hits to 303 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 167; Plants - 112; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Protein Annotations
BioGrid:4158DNASU:818821eggNOG:COG5596eggNOG:KOG3225EMBL:AC002561EMBL:AY086879EMBL:BT025617
EMBL:CP002685EMBL:DQ386643EnsemblPlants:AT2G42210EnsemblPlants:AT2G42210.1EnsemblPlants:AT2G42210.2EnsemblPlants:AT2G42210.3EnsemblPlants:AT2G42210.4
entrez:818821GeneID:818821Genevisible:O48528GO:GO:0005739GO:GO:0005741GO:GO:0005743GO:GO:0005747
GO:GO:0006811GO:GO:0009507GO:GO:0009527GO:GO:0009707GO:GO:0015266GO:GO:0015288GO:GO:0016020
GO:GO:0033365GO:GO:0042803GO:GO:0046930GO:GO:0071806hmmpanther:PTHR14110hmmpanther:PTHR14110:SF4HOGENOM:HOG000239422
InParanoid:O48528IntAct:O48528InterPro:IPR003397KEGG:ath:AT2G42210OMA:QTTRIDNPaxDb:O48528Pfam:O48528
Pfam:PF02466PIR:T00930PRIDE:O48528PRO:PR:O48528Proteomes:UP000006548RefSeq:NP_001031527.1RefSeq:NP_001031528.1
RefSeq:NP_001031529.1RefSeq:NP_565968.1STRING:3702.AT2G42210.2TAIR:AT2G42210tair10-symbols:ATOEP16-3tair10-symbols:OEP16-3TMHMM:TMhelix
UniGene:At.12442UniGene:At.67859UniProt:O48528
Coordinates (TAIR10) chr2:+:17590642..17591591
Molecular Weight (calculated) 17000.40 Da
IEP (calculated) 8.77
GRAVY (calculated) -0.05
Length 159 amino acids
Sequence (TAIR10)
(BLAST)
001: MDPAEMRYLE EEDGPLMKTI KGSITGFGAG TIYGTILATW KDVPRVERNV ALPGLIRTLK MMGTHGLTFA AIGGVYIGVE QLVQNFRSKR DFYNGAIGGF
101: VAGASVLGYR ARSIPTAIAA GATLAVTSAL IDSGGQTTRV DNGREYYPYT VEKRAEADS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)