suba logo
AT2G41970.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G59350.2); Has 104388 Blast hits to 103490 proteins in 4408 species: Archae - 91; Bacteria - 12474; Metazoa - 38816; Fungi - 7787; Plants - 30601; Viruses - 278; Other Eukaryotes - 14341 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G41970-MONOMERBioGrid:4134EC:2.7.11.-eggNOG:COG0515eggNOG:KOG1187EMBL:AK175234EMBL:AK175270
EMBL:AK176504EMBL:AK176586EMBL:AK176796EMBL:AK220678EMBL:BT010881EMBL:CP002685EMBL:U90439
EnsemblPlants:AT2G41970EnsemblPlants:AT2G41970.1entrez:818797GeneID:818797Genevisible:P93749GO:GO:0004674GO:GO:0004713
GO:GO:0005524GO:GO:0005886GO:GO:0009860GO:GO:0048768Gramene:AT2G41970.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF202
HOGENOM:HOG000116550InParanoid:P93749IntAct:P93749InterPro:IPR000719InterPro:IPR001245InterPro:IPR008266InterPro:IPR011009
InterPro:IPR017441InterPro:IPR020635KEGG:ath:AT2G41970OMA:SYGRVFCPaxDb:P93749Pfam:P93749Pfam:PF07714
Pfscan:PS50011PhylomeDB:P93749PIR:D84848PRIDE:P93749PRO:PR:P93749PROSITE:PS00107PROSITE:PS00109
PROSITE:PS50011ProteinModelPortal:P93749Proteomes:UP000006548Reactome:R-ATH-450302Reactome:R-ATH-450321RefSeq:NP_181728.1scanprosite:PS00107
scanprosite:PS00109SMART:SM00219SMR:P93749STRING:3702.AT2G41970.1SUPFAM:SSF56112TAIR:AT2G41970UniGene:At.42763
UniProt:P93749
Coordinates (TAIR10) chr2:-:17520517..17522304
Molecular Weight (calculated) 39380.00 Da
IEP (calculated) 8.36
GRAVY (calculated) -0.30
Length 365 amino acids
Sequence (TAIR10)
(BLAST)
001: MFCCGGADEE PAGPPANQYA APPNKAGNPN FGGGNRGEPR NPNAPRSGAP AKVLPIEIPS VALDELNRMA GNFGNKALIG EGSYGRVFCG KFKGEAVAIK
101: KLDASSSEEP DSDFTSQLSV VSRLKHDHFV ELLGYCLEAN NRILIYQFAT KGSLHDVLHG RKGVQGAEPG PVLNWNQRVK IAYGAAKGLE FLHEKVQPPI
201: VHRDVRSSNV LLFDDFVAKM ADFNLTNASS DTAARLHSTR VLGTFGYHAP EYAMTGQITQ KSDVYSFGVV LLELLTGRKP VDHTMPKGQQ SLVTWATPRL
301: SEDKVKQCID PKLNNDFPPK AVAKLAAVAA LCVQYEADFR PNMTIVVKAL QPLLNSKPAG PESTS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)