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AT2G41820.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:21826108 (2012): Golgi trans-Golgi network multivesicular body
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT2G33170.1); Has 158259 Blast hits to 89796 proteins in 3550 species: Archae - 104; Bacteria - 14087; Metazoa - 43911; Fungi - 4831; Plants - 79030; Viruses - 167; Other Eukaryotes - 16129 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G41820-MONOMERBioGrid:4118EC:2.7.10.1eggNOG:COG4886eggNOG:ENOG410IHE1EMBL:AC002339EMBL:AK228301
EMBL:CP002685EMBL:FJ708712EnsemblPlants:AT2G41820EnsemblPlants:AT2G41820.1entrez:818781Gene3D:3.80.10.10GeneID:818781
Genevisible:O22938GO:GO:0004714GO:GO:0005524GO:GO:0005886GO:GO:0016021Gramene:AT2G41820.1hmmpanther:PTHR27000
hmmpanther:PTHR27000:SF38HOGENOM:HOG000116551InParanoid:O22938InterPro:IPR000719InterPro:IPR001245InterPro:IPR001611InterPro:IPR003591
InterPro:IPR008266InterPro:IPR011009InterPro:IPR032675KEGG:ath:AT2G41820OMA:HEIGNCVPaxDb:O22938Pfam:O22938
Pfam:PF00560Pfam:PF07714Pfam:PF13855Pfscan:PS50011PhylomeDB:O22938PIR:E84846PRIDE:O22938
PRO:PR:O22938PROSITE:PS00109PROSITE:PS50011ProteinModelPortal:O22938Proteomes:UP000006548RefSeq:NP_181713.1scanprosite:PS00109
SMART:SM00369SMR:O22938STRING:3702.AT2G41820.1SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT2G41820TMHMM:TMhelix
UniGene:At.43213UniProt:O22938
Coordinates (TAIR10) chr2:+:17447170..17449914
Molecular Weight (calculated) 97251.30 Da
IEP (calculated) 6.25
GRAVY (calculated) 0.07
Length 890 amino acids
Sequence (TAIR10)
(BLAST)
001: MTFWCMSILL IVGFLSKSEL CEAQLSDEAT LVAINRELGV PGWSSNGTDY CTWVGLKCGV NNSFVEMLDL SGLQLRGNVT LISDLRSLKH LDLSGNNFNG
101: RIPTSFGNLS ELEFLDLSLN RFVGAIPVEF GKLRGLRAFN ISNNLLVGEI PDELKVLERL EEFQVSGNGL NGSIPHWVGN LSSLRVFTAY ENDLVGEIPN
201: GLGLVSELEL LNLHSNQLEG KIPKGIFEKG KLKVLVLTQN RLTGELPEAV GICSGLSSIR IGNNELVGVI PRTIGNISGL TYFEADKNNL SGEIVAEFSK
301: CSNLTLLNLA ANGFAGTIPT ELGQLINLQE LILSGNSLFG EIPKSFLGSG NLNKLDLSNN RLNGTIPKEL CSMPRLQYLL LDQNSIRGDI PHEIGNCVKL
401: LQLQLGRNYL TGTIPPEIGR MRNLQIALNL SFNHLHGSLP PELGKLDKLV SLDVSNNLLT GSIPPLLKGM MSLIEVNFSN NLLNGPVPVF VPFQKSPNSS
501: FLGNKELCGA PLSSSCGYSE DLDHLRYNHR VSYRIVLAVI GSGVAVFVSV TVVVLLFMMR EKQEKAAAKN VDVEENVEDE QPAIIAGNVF LENLKQGIDL
601: DAVVKATMKE SNKLSTGTFS SVYKAVMPSG MIVSVKKLKS MDRAISHHQN KMIRELERLS KLCHDHLVRP IGFVIYEDVA LLLHQHLPNG NLTQLIHEST
701: KKPEYQPDWP MRLSIAVGAA EGLAFLHQVA IIHLDVSSSN VLLDSGYKAV LGEIEISKLL DPSRGTASIS SVAGSFGYIP PEYAYTMQVT APGNVYSYGV
801: VLLEILTSRA PVEEEFGEGV DLVKWVHGAS ARGETPEQIL DAKLSTVSFA WRREMLAALK VALLCTDITP AKRPKMKKVV EMLQEVKQIK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)