AT2G41820.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT2G33170.1); Has 158259 Blast hits to 89796 proteins in 3550 species: Archae - 104; Bacteria - 14087; Metazoa - 43911; Fungi - 4831; Plants - 79030; Viruses - 167; Other Eukaryotes - 16129 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:17447170..17449914 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 97251.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.25 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.07 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 890 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTFWCMSILL IVGFLSKSEL CEAQLSDEAT LVAINRELGV PGWSSNGTDY CTWVGLKCGV NNSFVEMLDL SGLQLRGNVT LISDLRSLKH LDLSGNNFNG 101: RIPTSFGNLS ELEFLDLSLN RFVGAIPVEF GKLRGLRAFN ISNNLLVGEI PDELKVLERL EEFQVSGNGL NGSIPHWVGN LSSLRVFTAY ENDLVGEIPN 201: GLGLVSELEL LNLHSNQLEG KIPKGIFEKG KLKVLVLTQN RLTGELPEAV GICSGLSSIR IGNNELVGVI PRTIGNISGL TYFEADKNNL SGEIVAEFSK 301: CSNLTLLNLA ANGFAGTIPT ELGQLINLQE LILSGNSLFG EIPKSFLGSG NLNKLDLSNN RLNGTIPKEL CSMPRLQYLL LDQNSIRGDI PHEIGNCVKL 401: LQLQLGRNYL TGTIPPEIGR MRNLQIALNL SFNHLHGSLP PELGKLDKLV SLDVSNNLLT GSIPPLLKGM MSLIEVNFSN NLLNGPVPVF VPFQKSPNSS 501: FLGNKELCGA PLSSSCGYSE DLDHLRYNHR VSYRIVLAVI GSGVAVFVSV TVVVLLFMMR EKQEKAAAKN VDVEENVEDE QPAIIAGNVF LENLKQGIDL 601: DAVVKATMKE SNKLSTGTFS SVYKAVMPSG MIVSVKKLKS MDRAISHHQN KMIRELERLS KLCHDHLVRP IGFVIYEDVA LLLHQHLPNG NLTQLIHEST 701: KKPEYQPDWP MRLSIAVGAA EGLAFLHQVA IIHLDVSSSN VLLDSGYKAV LGEIEISKLL DPSRGTASIS SVAGSFGYIP PEYAYTMQVT APGNVYSYGV 801: VLLEILTSRA PVEEEFGEGV DLVKWVHGAS ARGETPEQIL DAKLSTVSFA WRREMLAALK VALLCTDITP AKRPKMKKVV EMLQEVKQIK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)