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AT2G41600.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mitochondrial glycoprotein family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Mitochondrial glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrial matrix; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); Has 28 Blast hits to 28 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IYGBeggNOG:ENOG410YUD8EMBL:AC002510EMBL:AY078932
EMBL:CP002685EnsemblPlants:AT2G41600EnsemblPlants:AT2G41600.1EnsemblPlants:AT2G41600.4
entrez:818758ExpressionAtlas:O22222Gene3D:3.10.280.10GeneID:818758
GO:GO:0005759Gramene:AT2G41600.1Gramene:AT2G41600.4hmmpanther:PTHR10826
hmmpanther:PTHR10826:SF7HOGENOM:HOG000006114InterPro:IPR003428PIR:T00816
Proteomes:UP000006548RefSeq:NP_001118502.1RefSeq:NP_181691.1SUPFAM:SSF54529
TAIR:AT2G41600UniGene:At.42812UniGene:At.48578UniProt:O22222
Coordinates (TAIR10) chr2:-:17345989..17346701
Molecular Weight (calculated) 17089.30 Da
IEP (calculated) 6.51
GRAVY (calculated) -0.34
Length 151 amino acids
Sequence (TAIR10)
(BLAST)
001: MRKLNPLLKR GLKAIENGDL LKILQSEIRH EISHPRFQGV ETGSLGDFKL DWDSPESQDI VLKRQFDSGE KVVVSALLQP EPIELEDDLV FPREAHAKVC
101: IKKPGLSSIL QFHCRVYESG SGSSHFDIES AYFIRSFVSA PSSTYGDHFF R
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)