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AT2G41530.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:22215637 (2012): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-formylglutathione hydrolase
Curator
Summary (TAIR10)
Encodes a protein with S-formylglutathione hydrolase activity.
Computational
Description (TAIR10)
S-formylglutathione hydrolase (SFGH); FUNCTIONS IN: hydrolase activity, acting on ester bonds, S-formylglutathione hydrolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative esterase (InterPro:IPR000801), S-formylglutathione hydrolase (InterPro:IPR014186); Has 3295 Blast hits to 3294 proteins in 1269 species: Archae - 2; Bacteria - 2478; Metazoa - 258; Fungi - 146; Plants - 60; Viruses - 0; Other Eukaryotes - 351 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G41530-MONOMERBioGrid:4088BRENDA:3.1.2.12EC:3.1.2.12eggNOG:COG0627eggNOG:KOG3101EMBL:AC002510
EMBL:AF378875EMBL:AF446861EMBL:AJ347732EMBL:AY044322EMBL:AY087636EMBL:CP002685EnsemblPlants:AT2G41530
EnsemblPlants:AT2G41530.1entrez:818751ESTHER:arath-SFGHGene3D:3.40.50.1820GeneID:818751Genevisible:Q8LAS8GO:GO:0018738
GO:GO:0046294GO:GO:0046686GO:GO:0048046GO:GO:0052689Gramene:AT2G41530.1gramene_pathway:3.1.2.12gramene_pathway:PWY-1801
hmmpanther:PTHR10061HOGENOM:HOG000263929InParanoid:Q8LAS8IntAct:Q8LAS8InterPro:IPR000801InterPro:IPR014186InterPro:IPR029058
iPTMnet:Q8LAS8KEGG:00680+3.1.2.12KEGG:ath:AT2G41530KO:K01070MINT:MINT-8069064OMA:SVELKCKPANTHER:PTHR10061
PaxDb:Q8LAS8Pfam:PF00756Pfam:Q8LAS8PhylomeDB:Q8LAS8PIR:T00809PRIDE:Q8LAS8PRO:PR:Q8LAS8
ProteinModelPortal:Q8LAS8Proteomes:UP000006548Reactome:R-ATH-156590RefSeq:NP_181684.1SMR:Q8LAS8STRING:3702.AT2G41530.1SUPFAM:SSF53474
TAIR:AT2G41530tair10-symbols:ATSFGHtair10-symbols:SFGHTIGRfam:TIGR02821TIGRFAMs:TIGR02821UniGene:At.12399UniProt:Q8LAS8
Coordinates (TAIR10) chr2:-:17323656..17325430
Molecular Weight (calculated) 31657.20 Da
IEP (calculated) 6.34
GRAVY (calculated) -0.32
Length 284 amino acids
Sequence (TAIR10)
(BLAST)
001: MASGLSEIGS TKMFDGYNKR YKHFSETLGC SMTFSIYFPP SASSSHKSPV LYWLSGLTCT DENFIIKSGA QRAASTHGIA LVAPDTSPRG LNVEGEADSY
101: DFGVGAGFYL NATQEKWKNW RMYDYVVKEL PKLLSENFSQ LDTTKASISG HSMGGHGALT IYLRNLDKYK SVSAFAPITN PINCAWGQKA FTNYLGDNKA
201: AWEEYDATCL ISKYNNLSAT ILIDQGENDQ FYPDQLLPSK FEEACKKVNA PLLLRLHPGY DHSYYFIATF IEDHISHHAQ ALEL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)